Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
COL15A1P39059 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.8■□□□□ 0.92
COL15A1P39059 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL15A1P39059 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL15A1P39059 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.8■□□□□ 0.92
COL15A1P39059 KRT8P12-202ENST00000472924 1397 ntBASIC20.8■□□□□ 0.92
COL15A1P39059 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL15A1P39059 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
COL15A1P39059 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.8■□□□□ 0.92
COL15A1P39059 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
COL15A1P39059 MIR1909-201ENST00000411312 80 ntBASIC20.8■□□□□ 0.92
COL15A1P39059 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC20.8■□□□□ 0.92
COL15A1P39059 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL15A1P39059 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.8■□□□□ 0.92
COL15A1P39059 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.8■□□□□ 0.92
COL15A1P39059 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL15A1P39059 AC017083.2-201ENST00000608069 979 ntBASIC20.8■□□□□ 0.92
COL15A1P39059 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
COL15A1P39059 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
COL15A1P39059 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL15A1P39059 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL15A1P39059 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
COL15A1P39059 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
COL15A1P39059 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.79■□□□□ 0.92
COL15A1P39059 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL15A1P39059 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.79■□□□□ 0.92
COL15A1P39059 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
COL15A1P39059 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL15A1P39059 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.79■□□□□ 0.92
COL15A1P39059 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL15A1P39059 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL15A1P39059 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.79■□□□□ 0.92
COL15A1P39059 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL15A1P39059 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL15A1P39059 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.79■□□□□ 0.92
COL15A1P39059 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.79■□□□□ 0.92
COL15A1P39059 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC20.79■□□□□ 0.92
COL15A1P39059 AL162274.1-201ENST00000617191 1098 ntBASIC20.79■□□□□ 0.92
COL15A1P39059 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL15A1P39059 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.79■□□□□ 0.92
COL15A1P39059 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.79■□□□□ 0.92
COL15A1P39059 AC105020.1-201ENST00000435356 2205 ntBASIC20.79■□□□□ 0.92
COL15A1P39059 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
COL15A1P39059 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL15A1P39059 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
COL15A1P39059 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
COL15A1P39059 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL15A1P39059 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
COL15A1P39059 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL15A1P39059 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL15A1P39059 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.78■□□□□ 0.92
COL15A1P39059 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.78■□□□□ 0.92
COL15A1P39059 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.78■□□□□ 0.92
COL15A1P39059 AL512652.2-201ENST00000625156 1716 ntBASIC20.78■□□□□ 0.92
COL15A1P39059 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL15A1P39059 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.78■□□□□ 0.92
COL15A1P39059 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL15A1P39059 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL15A1P39059 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL15A1P39059 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.78■□□□□ 0.92
COL15A1P39059 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL15A1P39059 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
COL15A1P39059 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.78■□□□□ 0.92
COL15A1P39059 AC024267.1-201ENST00000582320 895 ntBASIC20.78■□□□□ 0.92
COL15A1P39059 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.78■□□□□ 0.92
COL15A1P39059 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
COL15A1P39059 SRD5A3P1-201ENST00000603021 949 ntBASIC20.78■□□□□ 0.92
COL15A1P39059 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.78■□□□□ 0.92
COL15A1P39059 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC20.78■□□□□ 0.92
COL15A1P39059 AL033527.5-202ENST00000641632 1098 ntBASIC20.78■□□□□ 0.92
COL15A1P39059 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL15A1P39059 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL15A1P39059 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL15A1P39059 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL15A1P39059 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL15A1P39059 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL15A1P39059 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COL15A1P39059 AL589702.1-201ENST00000641229 1509 ntBASIC20.78■□□□□ 0.92
COL15A1P39059 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COL15A1P39059 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL15A1P39059 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL15A1P39059 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL15A1P39059 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL15A1P39059 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.77■□□□□ 0.92
COL15A1P39059 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.77■□□□□ 0.92
COL15A1P39059 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL15A1P39059 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
COL15A1P39059 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL15A1P39059 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
COL15A1P39059 SPDYE17-201ENST00000412399 783 ntBASIC20.77■□□□□ 0.92
COL15A1P39059 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.77■□□□□ 0.92
COL15A1P39059 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC20.77■□□□□ 0.92
COL15A1P39059 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.77■□□□□ 0.92
COL15A1P39059 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.77■□□□□ 0.92
COL15A1P39059 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.77■□□□□ 0.92
COL15A1P39059 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL15A1P39059 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL15A1P39059 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL15A1P39059 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.77■□□□□ 0.92
COL15A1P39059 AC106820.2-201ENST00000563775 3264 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms