Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
KRT9P35527 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
KRT9P35527 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.21■□□□□ 0.51
KRT9P35527 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT9P35527 AL512652.2-201ENST00000625156 1716 ntBASIC18.2■□□□□ 0.5
KRT9P35527 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT9P35527 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT9P35527 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT9P35527 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT9P35527 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT9P35527 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT9P35527 TOP3BP1-201ENST00000420768 1380 ntBASIC18.2■□□□□ 0.5
KRT9P35527 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
KRT9P35527 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT9P35527 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT9P35527 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
KRT9P35527 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
KRT9P35527 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT9P35527 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT9P35527 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT9P35527 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT9P35527 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT9P35527 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.2■□□□□ 0.5
KRT9P35527 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.2■□□□□ 0.5
KRT9P35527 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.2■□□□□ 0.5
KRT9P35527 EMBP1-201ENST00000458200 901 ntBASIC18.2■□□□□ 0.5
KRT9P35527 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT9P35527 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.2■□□□□ 0.5
KRT9P35527 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT9P35527 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT9P35527 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.2■□□□□ 0.5
KRT9P35527 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT9P35527 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT9P35527 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
KRT9P35527 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
KRT9P35527 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
KRT9P35527 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT9P35527 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT9P35527 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT9P35527 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT9P35527 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.2■□□□□ 0.5
KRT9P35527 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
KRT9P35527 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.19■□□□□ 0.5
KRT9P35527 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
KRT9P35527 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT9P35527 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
KRT9P35527 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
KRT9P35527 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
KRT9P35527 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
KRT9P35527 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT9P35527 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT9P35527 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT9P35527 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT9P35527 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
KRT9P35527 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT9P35527 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT9P35527 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.19■□□□□ 0.5
KRT9P35527 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT9P35527 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.19■□□□□ 0.5
KRT9P35527 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
KRT9P35527 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.19■□□□□ 0.5
KRT9P35527 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT9P35527 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT9P35527 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT9P35527 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT9P35527 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT9P35527 AC025062.2-201ENST00000605477 670 ntBASIC18.19■□□□□ 0.5
KRT9P35527 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.19■□□□□ 0.5
KRT9P35527 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.19■□□□□ 0.5
KRT9P35527 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT9P35527 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT9P35527 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT9P35527 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
KRT9P35527 AL603832.2-201ENST00000566195 2125 ntBASIC18.19■□□□□ 0.5
KRT9P35527 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
KRT9P35527 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
KRT9P35527 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
KRT9P35527 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT9P35527 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.18■□□□□ 0.5
KRT9P35527 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
KRT9P35527 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT9P35527 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT9P35527 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.18■□□□□ 0.5
KRT9P35527 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
KRT9P35527 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT9P35527 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.18■□□□□ 0.5
KRT9P35527 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
KRT9P35527 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.18■□□□□ 0.5
KRT9P35527 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.18■□□□□ 0.5
KRT9P35527 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.18■□□□□ 0.5
KRT9P35527 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.18■□□□□ 0.5
KRT9P35527 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.18■□□□□ 0.5
KRT9P35527 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.18■□□□□ 0.5
KRT9P35527 AC073648.2-201ENST00000510116 352 ntBASIC18.18■□□□□ 0.5
KRT9P35527 AC004706.3-202ENST00000621574 984 ntBASIC18.18■□□□□ 0.5
KRT9P35527 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms