Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
PTPN3P26045 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.91■□□□□ 0.3
PTPN3P26045 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
PTPN3P26045 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN3P26045 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 AC025580.3-201ENST00000617932 1424 ntBASIC16.91■□□□□ 0.3
PTPN3P26045 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
PTPN3P26045 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN3P26045 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.91■□□□□ 0.3
PTPN3P26045 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN3P26045 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.91■□□□□ 0.3
PTPN3P26045 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.91■□□□□ 0.3
PTPN3P26045 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
PTPN3P26045 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PTPN3P26045 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
PTPN3P26045 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN3P26045 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.91■□□□□ 0.3
PTPN3P26045 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN3P26045 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PTPN3P26045 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 BCAR1-209ENST00000546196 1340 ntBASIC16.91■□□□□ 0.3
PTPN3P26045 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN3P26045 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PTPN3P26045 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN3P26045 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN3P26045 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN3P26045 ZNF259P1-201ENST00000407656 1365 ntBASIC16.9■□□□□ 0.3
PTPN3P26045 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN3P26045 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
PTPN3P26045 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN3P26045 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN3P26045 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PTPN3P26045 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN3P26045 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN3P26045 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN3P26045 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PTPN3P26045 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN3P26045 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN3P26045 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN3P26045 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN3P26045 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN3P26045 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PTPN3P26045 POU5F1P6-201ENST00000466990 990 ntBASIC16.9■□□□□ 0.3
PTPN3P26045 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
PTPN3P26045 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.9■□□□□ 0.3
PTPN3P26045 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN3P26045 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.9■□□□□ 0.3
PTPN3P26045 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPN3P26045 KRT19P2-202ENST00000557173 1012 ntBASIC16.9■□□□□ 0.3
PTPN3P26045 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.9■□□□□ 0.3
PTPN3P26045 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPN3P26045 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN3P26045 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPN3P26045 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPN3P26045 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN3P26045 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN3P26045 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN3P26045 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN3P26045 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPN3P26045 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PTPN3P26045 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN3P26045 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PTPN3P26045 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.89■□□□□ 0.3
PTPN3P26045 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PTPN3P26045 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.89■□□□□ 0.3
PTPN3P26045 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PTPN3P26045 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
PTPN3P26045 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
PTPN3P26045 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PTPN3P26045 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPN3P26045 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN3P26045 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PTPN3P26045 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.89■□□□□ 0.29
PTPN3P26045 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN3P26045 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN3P26045 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN3P26045 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PTPN3P26045 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN3P26045 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PTPN3P26045 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN3P26045 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PTPN3P26045 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms