Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40P25942 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40P25942 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD40P25942 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40P25942 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CD40P25942 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
CD40P25942 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40P25942 AC105020.1-201ENST00000435356 2205 ntBASIC14.28□□□□□ -0.12
CD40P25942 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CD40P25942 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.28□□□□□ -0.12
CD40P25942 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CD40P25942 AC008677.1-201ENST00000519230 1561 ntBASIC14.28□□□□□ -0.12
CD40P25942 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.28□□□□□ -0.12
CD40P25942 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.28□□□□□ -0.12
CD40P25942 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.28□□□□□ -0.12
CD40P25942 AC051619.7-201ENST00000568314 623 ntBASIC14.28□□□□□ -0.12
CD40P25942 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CD40P25942 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.28□□□□□ -0.12
CD40P25942 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD40P25942 AC020765.3-201ENST00000613051 740 ntBASIC14.28□□□□□ -0.12
CD40P25942 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.28□□□□□ -0.12
CD40P25942 MIR6080-201ENST00000617359 66 ntBASIC14.28□□□□□ -0.12
CD40P25942 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.28□□□□□ -0.12
CD40P25942 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CD40P25942 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD40P25942 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD40P25942 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CD40P25942 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD40P25942 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD40P25942 AL603756.1-201ENST00000606511 2163 ntBASIC14.27□□□□□ -0.12
CD40P25942 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD40P25942 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.27□□□□□ -0.12
CD40P25942 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.27□□□□□ -0.12
CD40P25942 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD40P25942 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CD40P25942 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD40P25942 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CD40P25942 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD40P25942 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.27□□□□□ -0.12
CD40P25942 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.27□□□□□ -0.12
CD40P25942 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CD40P25942 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD40P25942 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CD40P25942 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.27□□□□□ -0.13
CD40P25942 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.27□□□□□ -0.13
CD40P25942 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.27□□□□□ -0.13
CD40P25942 KLF2P3-201ENST00000451977 1087 ntBASIC14.27□□□□□ -0.13
CD40P25942 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.27□□□□□ -0.13
CD40P25942 HLA-J-202ENST00000469281 1241 ntBASIC14.27□□□□□ -0.13
CD40P25942 AC125807.1-201ENST00000483097 614 ntBASIC14.27□□□□□ -0.13
CD40P25942 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CD40P25942 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.27□□□□□ -0.13
CD40P25942 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.27□□□□□ -0.13
CD40P25942 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.27□□□□□ -0.13
CD40P25942 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CD40P25942 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.27□□□□□ -0.13
CD40P25942 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CD40P25942 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.27□□□□□ -0.13
CD40P25942 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CD40P25942 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD40P25942 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD40P25942 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
CD40P25942 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD40P25942 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD40P25942 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD40P25942 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD40P25942 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40P25942 AC006538.1-201ENST00000567905 1585 ntBASIC14.26□□□□□ -0.13
CD40P25942 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CD40P25942 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CD40P25942 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD40P25942 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40P25942 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CD40P25942 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40P25942 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40P25942 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40P25942 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CD40P25942 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CD40P25942 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD40P25942 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.26□□□□□ -0.13
CD40P25942 AC107890.1-201ENST00000422478 521 ntBASIC14.26□□□□□ -0.13
CD40P25942 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.26□□□□□ -0.13
CD40P25942 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.26□□□□□ -0.13
CD40P25942 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40P25942 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.26□□□□□ -0.13
CD40P25942 DUX4L27-201ENST00000554796 1261 ntBASIC14.26□□□□□ -0.13
CD40P25942 RARRES2P9-201ENST00000565168 469 ntBASIC14.26□□□□□ -0.13
CD40P25942 AC011467.4-201ENST00000594891 528 ntBASIC14.26□□□□□ -0.13
CD40P25942 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CD40P25942 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.26□□□□□ -0.13
CD40P25942 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.26□□□□□ -0.13
CD40P25942 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40P25942 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CD40P25942 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.26□□□□□ -0.13
CD40P25942 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD40P25942 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.26□□□□□ -0.13
CD40P25942 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CD40P25942 AP3S2-216ENST00000617003 1561 ntBASIC14.26□□□□□ -0.13
CD40P25942 AL031731.1-201ENST00000642131 2094 ntBASIC14.26□□□□□ -0.13
CD40P25942 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms