Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TNFSF4P23510 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFSF4P23510 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFSF4P23510 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
TNFSF4P23510 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFSF4P23510 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
TNFSF4P23510 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFSF4P23510 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TNFSF4P23510 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFSF4P23510 AC067930.6-201ENST00000623257 4947 ntBASIC14.22□□□□□ -0.13
TNFSF4P23510 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.22□□□□□ -0.13
TNFSF4P23510 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.22□□□□□ -0.13
TNFSF4P23510 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TNFSF4P23510 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TNFSF4P23510 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
TNFSF4P23510 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.21□□□□□ -0.13
TNFSF4P23510 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.21□□□□□ -0.13
TNFSF4P23510 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TNFSF4P23510 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.21□□□□□ -0.13
TNFSF4P23510 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TNFSF4P23510 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.21□□□□□ -0.13
TNFSF4P23510 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.21□□□□□ -0.13
TNFSF4P23510 AC005915.1-201ENST00000624912 2018 ntBASIC14.21□□□□□ -0.13
TNFSF4P23510 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TNFSF4P23510 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 RNU1-129P-201ENST00000384064 167 ntBASIC14.21□□□□□ -0.13
TNFSF4P23510 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.21□□□□□ -0.13
TNFSF4P23510 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 FAM58CP-201ENST00000435741 640 ntBASIC14.21□□□□□ -0.13
TNFSF4P23510 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.21□□□□□ -0.13
TNFSF4P23510 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TNFSF4P23510 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
TNFSF4P23510 U1.21-201ENST00000580816 167 ntBASIC14.21□□□□□ -0.13
TNFSF4P23510 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.21□□□□□ -0.13
TNFSF4P23510 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TNFSF4P23510 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TNFSF4P23510 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TNFSF4P23510 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TNFSF4P23510 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TNFSF4P23510 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TNFSF4P23510 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TNFSF4P23510 AC105020.1-201ENST00000435356 2205 ntBASIC14.21□□□□□ -0.14
TNFSF4P23510 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TNFSF4P23510 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TNFSF4P23510 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
TNFSF4P23510 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.2□□□□□ -0.14
TNFSF4P23510 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.2□□□□□ -0.14
TNFSF4P23510 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TNFSF4P23510 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.2□□□□□ -0.14
TNFSF4P23510 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.2□□□□□ -0.14
TNFSF4P23510 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.2□□□□□ -0.14
TNFSF4P23510 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.2□□□□□ -0.14
TNFSF4P23510 UPF3AP3-201ENST00000420996 769 ntBASIC14.2□□□□□ -0.14
TNFSF4P23510 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.2□□□□□ -0.14
TNFSF4P23510 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.2□□□□□ -0.14
TNFSF4P23510 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.2□□□□□ -0.14
TNFSF4P23510 HLA-J-202ENST00000469281 1241 ntBASIC14.2□□□□□ -0.14
TNFSF4P23510 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.2□□□□□ -0.14
TNFSF4P23510 FAM86C2P-203ENST00000528684 1004 ntBASIC14.2□□□□□ -0.14
TNFSF4P23510 AC109635.5-201ENST00000533593 962 ntBASIC14.2□□□□□ -0.14
TNFSF4P23510 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.2□□□□□ -0.14
TNFSF4P23510 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.2□□□□□ -0.14
TNFSF4P23510 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.2□□□□□ -0.14
TNFSF4P23510 AC010327.4-202ENST00000591484 748 ntBASIC14.2□□□□□ -0.14
TNFSF4P23510 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.2□□□□□ -0.14
TNFSF4P23510 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.2□□□□□ -0.14
TNFSF4P23510 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms