Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN3P20807 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN3P20807 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.03■□□□□ 0.16
CAPN3P20807 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN3P20807 AL353135.1-201ENST00000606729 504 ntBASIC16.03■□□□□ 0.16
CAPN3P20807 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN3P20807 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN3P20807 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CAPN3P20807 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPN3P20807 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN3P20807 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN3P20807 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN3P20807 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN3P20807 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN3P20807 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN3P20807 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN3P20807 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN3P20807 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN3P20807 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN3P20807 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN3P20807 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CAPN3P20807 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN3P20807 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CAPN3P20807 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN3P20807 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN3P20807 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN3P20807 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CAPN3P20807 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN3P20807 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN3P20807 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN3P20807 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN3P20807 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN3P20807 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN3P20807 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN3P20807 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.02■□□□□ 0.16
CAPN3P20807 AC079776.2-201ENST00000641154 1609 ntBASIC16.02■□□□□ 0.16
CAPN3P20807 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN3P20807 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN3P20807 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.02■□□□□ 0.16
CAPN3P20807 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN3P20807 AKR1C7P-201ENST00000305623 895 ntBASIC16.02■□□□□ 0.16
CAPN3P20807 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN3P20807 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CAPN3P20807 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.02■□□□□ 0.16
CAPN3P20807 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN3P20807 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN3P20807 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN3P20807 AL031284.1-201ENST00000419297 478 ntBASIC16.02■□□□□ 0.16
CAPN3P20807 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.02■□□□□ 0.16
CAPN3P20807 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CAPN3P20807 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN3P20807 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.02■□□□□ 0.16
CAPN3P20807 FAM197Y8-203ENST00000450145 560 ntBASIC16.02■□□□□ 0.16
CAPN3P20807 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.02■□□□□ 0.16
CAPN3P20807 RNA5SP419-201ENST00000515908 135 ntBASIC16.02■□□□□ 0.16
CAPN3P20807 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN3P20807 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.02■□□□□ 0.16
CAPN3P20807 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN3P20807 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN3P20807 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.02■□□□□ 0.16
CAPN3P20807 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN3P20807 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN3P20807 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN3P20807 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CAPN3P20807 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN3P20807 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.02■□□□□ 0.15
CAPN3P20807 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN3P20807 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN3P20807 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN3P20807 AC006449.6-201ENST00000612330 2296 ntBASIC16.02■□□□□ 0.15
CAPN3P20807 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN3P20807 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
CAPN3P20807 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN3P20807 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN3P20807 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN3P20807 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN3P20807 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.02■□□□□ 0.15
CAPN3P20807 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN3P20807 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN3P20807 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN3P20807 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.02■□□□□ 0.15
CAPN3P20807 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN3P20807 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
CAPN3P20807 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN3P20807 AL031731.1-201ENST00000642131 2094 ntBASIC16.01■□□□□ 0.15
CAPN3P20807 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN3P20807 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN3P20807 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CAPN3P20807 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN3P20807 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.01■□□□□ 0.15
CAPN3P20807 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN3P20807 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN3P20807 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CAPN3P20807 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN3P20807 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.01■□□□□ 0.15
CAPN3P20807 KRT18P67-201ENST00000432816 1264 ntBASIC16.01■□□□□ 0.15
CAPN3P20807 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.01■□□□□ 0.15
CAPN3P20807 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.01■□□□□ 0.15
CAPN3P20807 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN3P20807 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms