Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.05■□□□□ 0.32
ERCC2P18074 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.05■□□□□ 0.32
ERCC2P18074 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC2P18074 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC2P18074 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.05■□□□□ 0.32
ERCC2P18074 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.05■□□□□ 0.32
ERCC2P18074 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC2P18074 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC2P18074 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC2P18074 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC2P18074 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.05■□□□□ 0.32
ERCC2P18074 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
ERCC2P18074 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.05■□□□□ 0.32
ERCC2P18074 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.05■□□□□ 0.32
ERCC2P18074 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.05■□□□□ 0.32
ERCC2P18074 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.05■□□□□ 0.32
ERCC2P18074 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.05■□□□□ 0.32
ERCC2P18074 AC002347.1-201ENST00000569543 541 ntBASIC17.05■□□□□ 0.32
ERCC2P18074 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC2P18074 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.05■□□□□ 0.32
ERCC2P18074 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC2P18074 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.05■□□□□ 0.32
ERCC2P18074 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.05■□□□□ 0.32
ERCC2P18074 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC2P18074 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC2P18074 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC2P18074 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC2P18074 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC2P18074 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC2P18074 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ERCC2P18074 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
ERCC2P18074 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.04■□□□□ 0.32
ERCC2P18074 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
ERCC2P18074 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC2P18074 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC2P18074 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ERCC2P18074 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC2P18074 AC002056.1-201ENST00000395613 760 ntBASIC17.04■□□□□ 0.32
ERCC2P18074 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.04■□□□□ 0.32
ERCC2P18074 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ERCC2P18074 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.04■□□□□ 0.32
ERCC2P18074 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.04■□□□□ 0.32
ERCC2P18074 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC2P18074 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC2P18074 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ERCC2P18074 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
ERCC2P18074 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC2P18074 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC2P18074 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC2P18074 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC2P18074 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.04■□□□□ 0.32
ERCC2P18074 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC2P18074 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC2P18074 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC2P18074 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.04■□□□□ 0.32
ERCC2P18074 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC2P18074 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ERCC2P18074 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ERCC2P18074 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.04■□□□□ 0.32
ERCC2P18074 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ERCC2P18074 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ERCC2P18074 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
ERCC2P18074 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.04■□□□□ 0.32
ERCC2P18074 AC016027.1-202ENST00000607927 1699 ntBASIC17.04■□□□□ 0.32
ERCC2P18074 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.04■□□□□ 0.32
ERCC2P18074 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC2P18074 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC2P18074 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC2P18074 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC2P18074 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ERCC2P18074 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC2P18074 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC2P18074 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.03■□□□□ 0.32
ERCC2P18074 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC2P18074 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC2P18074 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.03■□□□□ 0.32
ERCC2P18074 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
ERCC2P18074 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.03■□□□□ 0.32
ERCC2P18074 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.03■□□□□ 0.32
ERCC2P18074 MCCD1P2-201ENST00000423228 335 ntBASIC17.03■□□□□ 0.32
ERCC2P18074 AC004832.2-201ENST00000426397 482 ntBASIC17.03■□□□□ 0.32
ERCC2P18074 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.03■□□□□ 0.32
ERCC2P18074 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ERCC2P18074 AC112191.1-201ENST00000523689 701 ntBASIC17.03■□□□□ 0.32
ERCC2P18074 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ERCC2P18074 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.03■□□□□ 0.32
ERCC2P18074 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.03■□□□□ 0.32
ERCC2P18074 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.03■□□□□ 0.32
ERCC2P18074 AC099522.2-201ENST00000607001 744 ntBASIC17.03■□□□□ 0.32
ERCC2P18074 AL078644.1-201ENST00000609881 752 ntBASIC17.03■□□□□ 0.32
ERCC2P18074 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
ERCC2P18074 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ERCC2P18074 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC2P18074 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ERCC2P18074 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC2P18074 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ERCC2P18074 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.03■□□□□ 0.32
ERCC2P18074 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC2P18074 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ERCC2P18074 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms