Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN1P18031 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN1P18031 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN1P18031 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.54■□□□□ 0.4
PTPN1P18031 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.54■□□□□ 0.4
PTPN1P18031 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.54■□□□□ 0.4
PTPN1P18031 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN1P18031 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.54■□□□□ 0.4
PTPN1P18031 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.54■□□□□ 0.4
PTPN1P18031 HLA-J-203ENST00000494367 1087 ntBASIC17.54■□□□□ 0.4
PTPN1P18031 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.54■□□□□ 0.4
PTPN1P18031 PRYP6-201ENST00000514804 343 ntBASIC17.54■□□□□ 0.4
PTPN1P18031 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN1P18031 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.54■□□□□ 0.4
PTPN1P18031 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.54■□□□□ 0.4
PTPN1P18031 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.54■□□□□ 0.4
PTPN1P18031 AC073389.1-201ENST00000595595 795 ntBASIC17.54■□□□□ 0.4
PTPN1P18031 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPN1P18031 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN1P18031 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN1P18031 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN1P18031 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN1P18031 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN1P18031 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN1P18031 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN1P18031 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN1P18031 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PTPN1P18031 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN1P18031 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.54■□□□□ 0.4
PTPN1P18031 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTPN1P18031 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PTPN1P18031 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PTPN1P18031 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN1P18031 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN1P18031 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN1P18031 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PTPN1P18031 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN1P18031 AC073439.1-201ENST00000624121 1774 ntBASIC17.53■□□□□ 0.4
PTPN1P18031 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.53■□□□□ 0.4
PTPN1P18031 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PTPN1P18031 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PTPN1P18031 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN1P18031 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN1P18031 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN1P18031 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PTPN1P18031 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN1P18031 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PTPN1P18031 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN1P18031 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN1P18031 PMS2P2-201ENST00000425039 1128 ntBASIC17.53■□□□□ 0.4
PTPN1P18031 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.53■□□□□ 0.4
PTPN1P18031 AC105233.2-201ENST00000523697 349 ntBASIC17.53■□□□□ 0.4
PTPN1P18031 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN1P18031 AF228730.5-201ENST00000530288 346 ntBASIC17.53■□□□□ 0.4
PTPN1P18031 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN1P18031 SLC25A39P2-201ENST00000537614 270 ntBASIC17.53■□□□□ 0.4
PTPN1P18031 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN1P18031 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.53■□□□□ 0.4
PTPN1P18031 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN1P18031 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PTPN1P18031 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN1P18031 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN1P18031 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN1P18031 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.53■□□□□ 0.4
PTPN1P18031 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN1P18031 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PTPN1P18031 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPN1P18031 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.53■□□□□ 0.4
PTPN1P18031 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTPN1P18031 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN1P18031 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN1P18031 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN1P18031 GGT3P-204ENST00000453783 1664 ntBASIC17.52■□□□□ 0.4
PTPN1P18031 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.52■□□□□ 0.4
PTPN1P18031 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPN1P18031 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN1P18031 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN1P18031 AC011676.5-201ENST00000624864 2660 ntBASIC17.52■□□□□ 0.4
PTPN1P18031 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN1P18031 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPN1P18031 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN1P18031 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PTPN1P18031 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPN1P18031 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PTPN1P18031 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN1P18031 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPN1P18031 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PTPN1P18031 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPN1P18031 AC109322.1-201ENST00000524499 1264 ntBASIC17.52■□□□□ 0.4
PTPN1P18031 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.52■□□□□ 0.4
PTPN1P18031 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.52■□□□□ 0.4
PTPN1P18031 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.52■□□□□ 0.4
PTPN1P18031 LINC00628-201ENST00000628516 1289 ntBASIC17.52■□□□□ 0.4
PTPN1P18031 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN1P18031 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN1P18031 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPN1P18031 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PTPN1P18031 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.52■□□□□ 0.39
PTPN1P18031 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
PTPN1P18031 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms