Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A2P16615 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A2P16615 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A2P16615 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ATP2A2P16615 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A2P16615 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A2P16615 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP2A2P16615 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ATP2A2P16615 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP2A2P16615 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A2P16615 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A2P16615 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP2A2P16615 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A2P16615 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A2P16615 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ATP2A2P16615 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A2P16615 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A2P16615 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.34■□□□□ 0.53
ATP2A2P16615 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP2A2P16615 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP2A2P16615 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A2P16615 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A2P16615 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.34■□□□□ 0.53
ATP2A2P16615 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.34■□□□□ 0.53
ATP2A2P16615 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP2A2P16615 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP2A2P16615 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
ATP2A2P16615 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A2P16615 AC018695.7-201ENST00000624587 2492 ntBASIC18.34■□□□□ 0.53
ATP2A2P16615 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP2A2P16615 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A2P16615 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
ATP2A2P16615 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP2A2P16615 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A2P16615 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A2P16615 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.34■□□□□ 0.53
ATP2A2P16615 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A2P16615 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A2P16615 AC008894.3-201ENST00000624324 3103 ntBASIC18.34■□□□□ 0.53
ATP2A2P16615 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A2P16615 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A2P16615 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.33■□□□□ 0.53
ATP2A2P16615 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.33■□□□□ 0.53
ATP2A2P16615 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.33■□□□□ 0.53
ATP2A2P16615 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP2A2P16615 AC100757.3-201ENST00000622361 1406 ntBASIC18.33■□□□□ 0.53
ATP2A2P16615 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ATP2A2P16615 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.33■□□□□ 0.53
ATP2A2P16615 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.33■□□□□ 0.53
ATP2A2P16615 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
ATP2A2P16615 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP2A2P16615 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP2A2P16615 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP2A2P16615 AC108860.2-201ENST00000562760 2183 ntBASIC18.33■□□□□ 0.52
ATP2A2P16615 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ATP2A2P16615 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A2P16615 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ATP2A2P16615 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A2P16615 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.33■□□□□ 0.52
ATP2A2P16615 ATP5G2P4-201ENST00000442175 420 ntBASIC18.33■□□□□ 0.52
ATP2A2P16615 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.33■□□□□ 0.52
ATP2A2P16615 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.33■□□□□ 0.52
ATP2A2P16615 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.33■□□□□ 0.52
ATP2A2P16615 AC027307.2-201ENST00000591252 911 ntBASIC18.33■□□□□ 0.52
ATP2A2P16615 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.33■□□□□ 0.52
ATP2A2P16615 AC073592.8-201ENST00000624126 511 ntBASIC18.33■□□□□ 0.52
ATP2A2P16615 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A2P16615 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.33■□□□□ 0.52
ATP2A2P16615 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ATP2A2P16615 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A2P16615 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A2P16615 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A2P16615 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ATP2A2P16615 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A2P16615 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.33■□□□□ 0.52
ATP2A2P16615 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A2P16615 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP2A2P16615 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP2A2P16615 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ATP2A2P16615 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ATP2A2P16615 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ATP2A2P16615 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A2P16615 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP2A2P16615 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A2P16615 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A2P16615 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A2P16615 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A2P16615 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ATP2A2P16615 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A2P16615 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A2P16615 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A2P16615 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A2P16615 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A2P16615 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.32■□□□□ 0.52
ATP2A2P16615 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ATP2A2P16615 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.32■□□□□ 0.52
ATP2A2P16615 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.32■□□□□ 0.52
ATP2A2P16615 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A2P16615 AL139327.4-201ENST00000612362 153 ntBASIC18.32■□□□□ 0.52
ATP2A2P16615 AL590560.3-201ENST00000623350 461 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms