Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLTAP09496 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLTAP09496 AGGF1P2-201ENST00000426656 2106 ntBASIC18.16■□□□□ 0.5
CLTAP09496 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLTAP09496 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLTAP09496 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLTAP09496 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLTAP09496 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLTAP09496 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLTAP09496 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.16■□□□□ 0.5
CLTAP09496 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.16■□□□□ 0.5
CLTAP09496 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.16■□□□□ 0.5
CLTAP09496 ADH5P3-201ENST00000433842 1137 ntBASIC18.16■□□□□ 0.5
CLTAP09496 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLTAP09496 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.16■□□□□ 0.5
CLTAP09496 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.16■□□□□ 0.5
CLTAP09496 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
CLTAP09496 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.16■□□□□ 0.5
CLTAP09496 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.16■□□□□ 0.5
CLTAP09496 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLTAP09496 AC021097.1-201ENST00000607902 574 ntBASIC18.16■□□□□ 0.5
CLTAP09496 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
CLTAP09496 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLTAP09496 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLTAP09496 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
CLTAP09496 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CLTAP09496 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLTAP09496 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLTAP09496 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLTAP09496 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CLTAP09496 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.16■□□□□ 0.5
CLTAP09496 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.16■□□□□ 0.5
CLTAP09496 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.16■□□□□ 0.5
CLTAP09496 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CLTAP09496 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLTAP09496 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLTAP09496 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLTAP09496 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLTAP09496 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLTAP09496 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLTAP09496 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLTAP09496 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLTAP09496 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CLTAP09496 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.15■□□□□ 0.5
CLTAP09496 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CLTAP09496 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLTAP09496 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLTAP09496 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLTAP09496 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLTAP09496 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLTAP09496 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CLTAP09496 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLTAP09496 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.15■□□□□ 0.5
CLTAP09496 AC254562.1-201ENST00000417586 456 ntBASIC18.15■□□□□ 0.5
CLTAP09496 RPS8P6-201ENST00000426177 609 ntBASIC18.15■□□□□ 0.5
CLTAP09496 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.15■□□□□ 0.5
CLTAP09496 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.15■□□□□ 0.5
CLTAP09496 DNAJB3-202ENST00000449667 1266 ntBASIC18.15■□□□□ 0.5
CLTAP09496 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLTAP09496 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLTAP09496 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.15■□□□□ 0.5
CLTAP09496 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLTAP09496 RARRES2P8-201ENST00000566335 367 ntBASIC18.15■□□□□ 0.5
CLTAP09496 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.15■□□□□ 0.5
CLTAP09496 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLTAP09496 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.15■□□□□ 0.5
CLTAP09496 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.15■□□□□ 0.5
CLTAP09496 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLTAP09496 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLTAP09496 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLTAP09496 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CLTAP09496 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLTAP09496 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLTAP09496 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLTAP09496 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.15■□□□□ 0.5
CLTAP09496 AL671710.1-201ENST00000610245 2349 ntBASIC18.15■□□□□ 0.5
CLTAP09496 KRT8P39-201ENST00000396270 1433 ntBASIC18.15■□□□□ 0.5
CLTAP09496 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLTAP09496 SNX33P1-201ENST00000592116 1762 ntBASIC18.14■□□□□ 0.5
CLTAP09496 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CLTAP09496 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.14■□□□□ 0.49
CLTAP09496 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLTAP09496 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLTAP09496 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLTAP09496 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CLTAP09496 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLTAP09496 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLTAP09496 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLTAP09496 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.14■□□□□ 0.49
CLTAP09496 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLTAP09496 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
CLTAP09496 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CLTAP09496 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLTAP09496 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLTAP09496 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLTAP09496 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLTAP09496 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLTAP09496 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLTAP09496 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.14■□□□□ 0.49
CLTAP09496 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms