Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.37■□□□□ 0.53
TPM1P09493 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TPM1P09493 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.37■□□□□ 0.53
TPM1P09493 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.37■□□□□ 0.53
TPM1P09493 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.37■□□□□ 0.53
TPM1P09493 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TPM1P09493 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.37■□□□□ 0.53
TPM1P09493 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.37■□□□□ 0.53
TPM1P09493 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM1P09493 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM1P09493 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM1P09493 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC18.36■□□□□ 0.53
TPM1P09493 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TPM1P09493 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM1P09493 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM1P09493 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM1P09493 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM1P09493 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TPM1P09493 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM1P09493 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM1P09493 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TPM1P09493 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM1P09493 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.36■□□□□ 0.53
TPM1P09493 LINC00982-205ENST00000420957 435 ntBASIC18.36■□□□□ 0.53
TPM1P09493 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TPM1P09493 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TPM1P09493 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.36■□□□□ 0.53
TPM1P09493 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TPM1P09493 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.36■□□□□ 0.53
TPM1P09493 AP005901.3-202ENST00000581653 237 ntBASIC18.36■□□□□ 0.53
TPM1P09493 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.36■□□□□ 0.53
TPM1P09493 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.36■□□□□ 0.53
TPM1P09493 AC002310.6-201ENST00000624451 1377 ntBASIC18.36■□□□□ 0.53
TPM1P09493 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
TPM1P09493 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM1P09493 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM1P09493 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM1P09493 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM1P09493 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM1P09493 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM1P09493 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
TPM1P09493 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TPM1P09493 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM1P09493 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM1P09493 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM1P09493 AC233702.3-201ENST00000578656 1387 ntBASIC18.35■□□□□ 0.53
TPM1P09493 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM1P09493 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM1P09493 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
TPM1P09493 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.35■□□□□ 0.53
TPM1P09493 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
TPM1P09493 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM1P09493 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TPM1P09493 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM1P09493 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.35■□□□□ 0.53
TPM1P09493 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM1P09493 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TPM1P09493 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM1P09493 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TPM1P09493 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM1P09493 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM1P09493 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TPM1P09493 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM1P09493 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM1P09493 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
TPM1P09493 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM1P09493 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM1P09493 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
TPM1P09493 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TPM1P09493 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM1P09493 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TPM1P09493 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM1P09493 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM1P09493 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM1P09493 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TPM1P09493 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.34■□□□□ 0.53
TPM1P09493 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.34■□□□□ 0.53
TPM1P09493 AC243591.1-201ENST00000452967 1364 ntBASIC18.34■□□□□ 0.53
TPM1P09493 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TPM1P09493 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.34■□□□□ 0.53
TPM1P09493 KRT18P1-202ENST00000452408 1331 ntBASIC18.34■□□□□ 0.53
TPM1P09493 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TPM1P09493 AL596087.1-201ENST00000400979 1969 ntBASIC18.34■□□□□ 0.53
TPM1P09493 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM1P09493 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM1P09493 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.34■□□□□ 0.53
TPM1P09493 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TPM1P09493 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.34■□□□□ 0.53
TPM1P09493 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TPM1P09493 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.34■□□□□ 0.53
TPM1P09493 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TPM1P09493 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
TPM1P09493 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.34■□□□□ 0.53
TPM1P09493 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms