Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC10.14□□□□□ -0.79
APOBP04114 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
APOBP04114 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
APOBP04114 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
APOBP04114 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
APOBP04114 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
APOBP04114 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOBP04114 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC10.13□□□□□ -0.79
APOBP04114 RHBDF1P1-201ENST00000427504 1941 ntBASIC10.13□□□□□ -0.79
APOBP04114 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOBP04114 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC10.13□□□□□ -0.79
APOBP04114 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC10.13□□□□□ -0.79
APOBP04114 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC10.13□□□□□ -0.79
APOBP04114 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
APOBP04114 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOBP04114 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
APOBP04114 AL607033.1-201ENST00000623900 1599 ntBASIC10.13□□□□□ -0.79
APOBP04114 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
APOBP04114 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC10.13□□□□□ -0.79
APOBP04114 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC10.13□□□□□ -0.79
APOBP04114 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
APOBP04114 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOBP04114 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC10.13□□□□□ -0.79
APOBP04114 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
APOBP04114 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC10.13□□□□□ -0.79
APOBP04114 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOBP04114 AL627389.1-201ENST00000413508 1182 ntBASIC10.13□□□□□ -0.79
APOBP04114 FADS2-212ENST00000522639 360 ntTSL 5 BASIC10.13□□□□□ -0.79
APOBP04114 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC10.13□□□□□ -0.79
APOBP04114 RPL8-205ENST00000527914 551 ntTSL 3 BASIC10.13□□□□□ -0.79
APOBP04114 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC10.13□□□□□ -0.79
APOBP04114 FADS2-215ENST00000574708 385 ntTSL 3 BASIC10.13□□□□□ -0.79
APOBP04114 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
APOBP04114 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC10.13□□□□□ -0.79
APOBP04114 ATF5-205ENST00000600336 682 ntTSL 2 BASIC10.13□□□□□ -0.79
APOBP04114 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
APOBP04114 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC10.13□□□□□ -0.79
APOBP04114 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOBP04114 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
APOBP04114 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
APOBP04114 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
APOBP04114 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
APOBP04114 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC10.13□□□□□ -0.79
APOBP04114 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC10.13□□□□□ -0.79
APOBP04114 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
APOBP04114 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC10.13□□□□□ -0.79
APOBP04114 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC10.13□□□□□ -0.79
APOBP04114 MIR6069-201ENST00000620069 79 ntBASIC10.13□□□□□ -0.79
APOBP04114 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOBP04114 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC10.13□□□□□ -0.79
APOBP04114 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC10.13□□□□□ -0.79
APOBP04114 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
APOBP04114 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC10.13□□□□□ -0.79
APOBP04114 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOBP04114 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
APOBP04114 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC10.13□□□□□ -0.79
APOBP04114 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
APOBP04114 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC10.13□□□□□ -0.79
APOBP04114 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
APOBP04114 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
APOBP04114 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOBP04114 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOBP04114 APOA1-205ENST00000375329 927 ntTSL 2 BASIC10.12□□□□□ -0.79
APOBP04114 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOBP04114 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC10.12□□□□□ -0.79
APOBP04114 AC091804.1-201ENST00000486888 567 ntBASIC10.12□□□□□ -0.79
APOBP04114 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC10.12□□□□□ -0.79
APOBP04114 AC106872.11-201ENST00000605838 421 ntBASIC10.12□□□□□ -0.79
APOBP04114 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
APOBP04114 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC10.12□□□□□ -0.79
APOBP04114 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOBP04114 AC092068.3-201ENST00000587894 2016 ntBASIC10.12□□□□□ -0.79
APOBP04114 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC10.12□□□□□ -0.79
APOBP04114 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOBP04114 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOBP04114 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
APOBP04114 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC10.12□□□□□ -0.79
APOBP04114 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOBP04114 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOBP04114 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOBP04114 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
APOBP04114 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC10.12□□□□□ -0.79
APOBP04114 NKAIN1P1-201ENST00000435754 582 ntBASIC10.12□□□□□ -0.79
APOBP04114 ENPP7P5-201ENST00000541031 1031 ntBASIC10.12□□□□□ -0.79
APOBP04114 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC10.12□□□□□ -0.79
APOBP04114 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC10.12□□□□□ -0.79
APOBP04114 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOBP04114 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
APOBP04114 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOBP04114 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
APOBP04114 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC10.12□□□□□ -0.79
APOBP04114 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
APOBP04114 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOBP04114 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
APOBP04114 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC10.12□□□□□ -0.79
APOBP04114 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
APOBP04114 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC10.12□□□□□ -0.79
APOBP04114 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC10.12□□□□□ -0.79
APOBP04114 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC10.12□□□□□ -0.79
APOBP04114 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms