Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 AL603756.1-201ENST00000606511 2163 ntBASIC17.9■□□□□ 0.46
CHRNA1P02708 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHRNA1P02708 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CHRNA1P02708 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.9■□□□□ 0.46
CHRNA1P02708 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
CHRNA1P02708 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.9■□□□□ 0.46
CHRNA1P02708 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRNA1P02708 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRNA1P02708 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHRNA1P02708 SPDYE18-201ENST00000510091 1050 ntBASIC17.9■□□□□ 0.46
CHRNA1P02708 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.9■□□□□ 0.46
CHRNA1P02708 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.9■□□□□ 0.46
CHRNA1P02708 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.9■□□□□ 0.46
CHRNA1P02708 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
CHRNA1P02708 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRNA1P02708 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHRNA1P02708 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.9■□□□□ 0.46
CHRNA1P02708 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRNA1P02708 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRNA1P02708 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRNA1P02708 KRT8P12-202ENST00000472924 1397 ntBASIC17.9■□□□□ 0.46
CHRNA1P02708 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHRNA1P02708 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHRNA1P02708 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHRNA1P02708 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHRNA1P02708 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA1P02708 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA1P02708 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.89■□□□□ 0.45
CHRNA1P02708 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA1P02708 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA1P02708 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.89■□□□□ 0.45
CHRNA1P02708 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA1P02708 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
CHRNA1P02708 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA1P02708 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.89■□□□□ 0.45
CHRNA1P02708 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA1P02708 OR8S1-201ENST00000310194 1080 ntBASIC17.89■□□□□ 0.45
CHRNA1P02708 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CHRNA1P02708 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA1P02708 SPDYE17-201ENST00000412399 783 ntBASIC17.89■□□□□ 0.45
CHRNA1P02708 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.89■□□□□ 0.45
CHRNA1P02708 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA1P02708 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.89■□□□□ 0.45
CHRNA1P02708 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.89■□□□□ 0.45
CHRNA1P02708 AC140912.1-201ENST00000577171 1054 ntBASIC17.89■□□□□ 0.45
CHRNA1P02708 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.89■□□□□ 0.45
CHRNA1P02708 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA1P02708 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.89■□□□□ 0.45
CHRNA1P02708 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.89■□□□□ 0.45
CHRNA1P02708 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CHRNA1P02708 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA1P02708 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CHRNA1P02708 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA1P02708 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA1P02708 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA1P02708 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA1P02708 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CHRNA1P02708 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CHRNA1P02708 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA1P02708 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA1P02708 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA1P02708 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRNA1P02708 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.88■□□□□ 0.45
CHRNA1P02708 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.88■□□□□ 0.45
CHRNA1P02708 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA1P02708 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA1P02708 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA1P02708 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CHRNA1P02708 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRNA1P02708 SPDYE19P-201ENST00000338590 713 ntBASIC17.88■□□□□ 0.45
CHRNA1P02708 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.88■□□□□ 0.45
CHRNA1P02708 DGCR5-201ENST00000399539 862 ntBASIC17.88■□□□□ 0.45
CHRNA1P02708 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.88■□□□□ 0.45
CHRNA1P02708 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.88■□□□□ 0.45
CHRNA1P02708 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.88■□□□□ 0.45
CHRNA1P02708 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.88■□□□□ 0.45
CHRNA1P02708 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.88■□□□□ 0.45
CHRNA1P02708 CHCHD2P3-201ENST00000603038 451 ntBASIC17.88■□□□□ 0.45
CHRNA1P02708 AL033527.5-202ENST00000641632 1098 ntBASIC17.88■□□□□ 0.45
CHRNA1P02708 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms