Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL606495.2-201ENST00000605867 535 ntBASIC19.09■□□□□ 0.65
COL2A1P02458 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL2A1P02458 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
COL2A1P02458 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL2A1P02458 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.09■□□□□ 0.65
COL2A1P02458 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL2A1P02458 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
COL2A1P02458 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL2A1P02458 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL2A1P02458 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL2A1P02458 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.09■□□□□ 0.65
COL2A1P02458 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.09■□□□□ 0.65
COL2A1P02458 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL2A1P02458 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.09■□□□□ 0.65
COL2A1P02458 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL2A1P02458 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL2A1P02458 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL2A1P02458 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL2A1P02458 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC19.09■□□□□ 0.65
COL2A1P02458 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.09■□□□□ 0.65
COL2A1P02458 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL2A1P02458 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.09■□□□□ 0.65
COL2A1P02458 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.09■□□□□ 0.65
COL2A1P02458 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.09■□□□□ 0.65
COL2A1P02458 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL2A1P02458 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
COL2A1P02458 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
COL2A1P02458 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.08■□□□□ 0.65
COL2A1P02458 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.08■□□□□ 0.65
COL2A1P02458 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.08■□□□□ 0.65
COL2A1P02458 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL2A1P02458 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
COL2A1P02458 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL2A1P02458 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL2A1P02458 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.08■□□□□ 0.64
COL2A1P02458 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
COL2A1P02458 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.08■□□□□ 0.64
COL2A1P02458 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL2A1P02458 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL2A1P02458 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL2A1P02458 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL2A1P02458 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
COL2A1P02458 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
COL2A1P02458 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.08■□□□□ 0.64
COL2A1P02458 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.08■□□□□ 0.64
COL2A1P02458 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.08■□□□□ 0.64
COL2A1P02458 GIMAP3P-201ENST00000495150 836 ntBASIC19.08■□□□□ 0.64
COL2A1P02458 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.08■□□□□ 0.64
COL2A1P02458 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL2A1P02458 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL2A1P02458 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
COL2A1P02458 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL2A1P02458 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
COL2A1P02458 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COL2A1P02458 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
COL2A1P02458 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL2A1P02458 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
COL2A1P02458 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.07■□□□□ 0.64
COL2A1P02458 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.07■□□□□ 0.64
COL2A1P02458 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.07■□□□□ 0.64
COL2A1P02458 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.07■□□□□ 0.64
COL2A1P02458 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
COL2A1P02458 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL2A1P02458 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL2A1P02458 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL2A1P02458 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
COL2A1P02458 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL2A1P02458 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
COL2A1P02458 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
COL2A1P02458 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.07■□□□□ 0.64
COL2A1P02458 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
COL2A1P02458 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.07■□□□□ 0.64
COL2A1P02458 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.07■□□□□ 0.64
COL2A1P02458 AC093726.1-201ENST00000608064 963 ntBASIC19.07■□□□□ 0.64
COL2A1P02458 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.07■□□□□ 0.64
COL2A1P02458 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.07■□□□□ 0.64
COL2A1P02458 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
COL2A1P02458 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL2A1P02458 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL2A1P02458 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL2A1P02458 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL2A1P02458 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.07■□□□□ 0.64
COL2A1P02458 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL2A1P02458 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL2A1P02458 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL2A1P02458 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL2A1P02458 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
COL2A1P02458 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL2A1P02458 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
COL2A1P02458 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL2A1P02458 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.06■□□□□ 0.64
COL2A1P02458 INE1-201ENST00000456273 945 ntBASIC19.06■□□□□ 0.64
COL2A1P02458 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.06■□□□□ 0.64
COL2A1P02458 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL2A1P02458 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
COL2A1P02458 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
COL2A1P02458 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL2A1P02458 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.06■□□□□ 0.64
COL2A1P02458 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL2A1P02458 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms