Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
IFNB1P01574 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
IFNB1P01574 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.23■□□□□ 0.35
IFNB1P01574 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.23■□□□□ 0.35
IFNB1P01574 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.23■□□□□ 0.35
IFNB1P01574 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 ELK2BP-201ENST00000415014 1224 ntBASIC17.23■□□□□ 0.35
IFNB1P01574 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
IFNB1P01574 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.23■□□□□ 0.35
IFNB1P01574 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.23■□□□□ 0.35
IFNB1P01574 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.23■□□□□ 0.35
IFNB1P01574 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
IFNB1P01574 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.23■□□□□ 0.35
IFNB1P01574 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.23■□□□□ 0.35
IFNB1P01574 LINC01711-201ENST00000598340 967 ntBASIC17.23■□□□□ 0.35
IFNB1P01574 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
IFNB1P01574 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.23■□□□□ 0.35
IFNB1P01574 AL512652.2-201ENST00000625156 1716 ntBASIC17.23■□□□□ 0.35
IFNB1P01574 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
IFNB1P01574 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.23■□□□□ 0.35
IFNB1P01574 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.23■□□□□ 0.35
IFNB1P01574 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
IFNB1P01574 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFNB1P01574 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
IFNB1P01574 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFNB1P01574 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFNB1P01574 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFNB1P01574 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFNB1P01574 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IFNB1P01574 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IFNB1P01574 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFNB1P01574 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
IFNB1P01574 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.22■□□□□ 0.35
IFNB1P01574 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IFNB1P01574 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.22■□□□□ 0.35
IFNB1P01574 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.22■□□□□ 0.35
IFNB1P01574 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.22■□□□□ 0.35
IFNB1P01574 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.22■□□□□ 0.35
IFNB1P01574 AC025062.2-201ENST00000605477 670 ntBASIC17.22■□□□□ 0.35
IFNB1P01574 REXO1L3P-201ENST00000622202 1288 ntBASIC17.22■□□□□ 0.35
IFNB1P01574 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
IFNB1P01574 AF228730.7-201ENST00000641842 219 ntBASIC17.22■□□□□ 0.35
IFNB1P01574 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.22■□□□□ 0.35
IFNB1P01574 AC007950.2-201ENST00000615045 2347 ntBASIC17.22■□□□□ 0.35
IFNB1P01574 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.22■□□□□ 0.35
IFNB1P01574 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
IFNB1P01574 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFNB1P01574 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
IFNB1P01574 AL031731.1-201ENST00000642131 2094 ntBASIC17.22■□□□□ 0.35
IFNB1P01574 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.22■□□□□ 0.35
IFNB1P01574 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IFNB1P01574 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.22■□□□□ 0.35
IFNB1P01574 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFNB1P01574 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IFNB1P01574 AL162727.3-201ENST00000635661 2787 ntBASIC17.22■□□□□ 0.35
IFNB1P01574 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.22■□□□□ 0.35
IFNB1P01574 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFNB1P01574 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IFNB1P01574 AC131009.4-201ENST00000624048 1740 ntBASIC17.21■□□□□ 0.35
IFNB1P01574 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.21■□□□□ 0.35
IFNB1P01574 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFNB1P01574 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFNB1P01574 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFNB1P01574 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFNB1P01574 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFNB1P01574 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFNB1P01574 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IFNB1P01574 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.21■□□□□ 0.35
IFNB1P01574 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.21■□□□□ 0.35
IFNB1P01574 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFNB1P01574 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.21■□□□□ 0.35
IFNB1P01574 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.21■□□□□ 0.35
IFNB1P01574 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
IFNB1P01574 AKR1C7P-201ENST00000305623 895 ntBASIC17.21■□□□□ 0.35
IFNB1P01574 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms