Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 AC103564.2-201ENST00000432853 1299 ntBASIC17.05■□□□□ 0.32
TOP3BO95985 FAM58CP-201ENST00000435741 640 ntBASIC17.05■□□□□ 0.32
TOP3BO95985 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TOP3BO95985 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 AP000344.2-201ENST00000512987 629 ntBASIC17.05■□□□□ 0.32
TOP3BO95985 AC093520.2-201ENST00000561830 333 ntBASIC17.05■□□□□ 0.32
TOP3BO95985 PDPK2P-202ENST00000562415 1191 ntBASIC17.05■□□□□ 0.32
TOP3BO95985 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.05■□□□□ 0.32
TOP3BO95985 AC004790.2-201ENST00000623588 572 ntBASIC17.05■□□□□ 0.32
TOP3BO95985 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.05■□□□□ 0.32
TOP3BO95985 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 HLA-A-202ENST00000376806 1854 ntBASIC17.05■□□□□ 0.32
TOP3BO95985 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TOP3BO95985 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.05■□□□□ 0.32
TOP3BO95985 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.04■□□□□ 0.32
TOP3BO95985 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.04■□□□□ 0.32
TOP3BO95985 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.04■□□□□ 0.32
TOP3BO95985 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.04■□□□□ 0.32
TOP3BO95985 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TOP3BO95985 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.04■□□□□ 0.32
TOP3BO95985 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.04■□□□□ 0.32
TOP3BO95985 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.04■□□□□ 0.32
TOP3BO95985 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.04■□□□□ 0.32
TOP3BO95985 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 PMPCAP1-201ENST00000508114 1576 ntBASIC17.04■□□□□ 0.32
TOP3BO95985 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.04■□□□□ 0.32
TOP3BO95985 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.04■□□□□ 0.32
TOP3BO95985 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
TOP3BO95985 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.04■□□□□ 0.32
TOP3BO95985 STK19B-204ENST00000512515 211 ntBASIC17.04■□□□□ 0.32
TOP3BO95985 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.04■□□□□ 0.32
TOP3BO95985 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
TOP3BO95985 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.04■□□□□ 0.32
TOP3BO95985 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.04■□□□□ 0.32
TOP3BO95985 Z92544.3-201ENST00000624747 417 ntBASIC17.04■□□□□ 0.32
TOP3BO95985 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TOP3BO95985 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.04■□□□□ 0.32
TOP3BO95985 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TOP3BO95985 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
TOP3BO95985 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.04■□□□□ 0.32
TOP3BO95985 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TOP3BO95985 AL162727.3-201ENST00000635661 2787 ntBASIC17.04■□□□□ 0.32
TOP3BO95985 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TOP3BO95985 ALOX12P2-203ENST00000570921 1945 ntBASIC17.04■□□□□ 0.32
TOP3BO95985 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TOP3BO95985 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TOP3BO95985 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TOP3BO95985 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.03■□□□□ 0.32
TOP3BO95985 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TOP3BO95985 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
TOP3BO95985 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.03■□□□□ 0.32
TOP3BO95985 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TOP3BO95985 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TOP3BO95985 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TOP3BO95985 IGLL3P-201ENST00000412472 434 ntBASIC17.03■□□□□ 0.32
TOP3BO95985 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.03■□□□□ 0.32
TOP3BO95985 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.03■□□□□ 0.32
TOP3BO95985 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.03■□□□□ 0.32
TOP3BO95985 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.03■□□□□ 0.32
TOP3BO95985 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.03■□□□□ 0.32
TOP3BO95985 AC012645.4-201ENST00000610691 1061 ntBASIC17.03■□□□□ 0.32
TOP3BO95985 AC004877.2-201ENST00000623941 599 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms