Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LTN1O94822 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC21.59■■□□□ 1.05
LTN1O94822 AC022494.1-201ENST00000466044 728 ntBASIC21.59■■□□□ 1.05
LTN1O94822 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC21.59■■□□□ 1.05
LTN1O94822 PAM16-215ENST00000577031 548 ntTSL 4 BASIC21.59■■□□□ 1.05
LTN1O94822 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC21.59■■□□□ 1.05
LTN1O94822 TMEM261P1-201ENST00000604899 340 ntBASIC21.59■■□□□ 1.05
LTN1O94822 MIR8072-201ENST00000614241 80 ntBASIC21.59■■□□□ 1.05
LTN1O94822 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
LTN1O94822 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC21.59■■□□□ 1.05
LTN1O94822 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC21.59■■□□□ 1.05
LTN1O94822 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
LTN1O94822 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LTN1O94822 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
LTN1O94822 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LTN1O94822 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.59■■□□□ 1.05
LTN1O94822 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
LTN1O94822 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
LTN1O94822 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LTN1O94822 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC21.59■■□□□ 1.05
LTN1O94822 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC21.59■■□□□ 1.05
LTN1O94822 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC21.59■■□□□ 1.05
LTN1O94822 RARRES2P5-201ENST00000564013 466 ntBASIC21.59■■□□□ 1.05
LTN1O94822 PAM16-204ENST00000571941 674 ntTSL 3 BASIC21.59■■□□□ 1.05
LTN1O94822 NAA38-206ENST00000576384 424 ntTSL 2 BASIC21.59■■□□□ 1.05
LTN1O94822 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC21.59■■□□□ 1.05
LTN1O94822 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC21.59■■□□□ 1.05
LTN1O94822 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LTN1O94822 AC005622.1-201ENST00000636801 1703 ntBASIC21.58■■□□□ 1.05
LTN1O94822 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
LTN1O94822 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
LTN1O94822 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC21.58■■□□□ 1.05
LTN1O94822 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC21.58■■□□□ 1.05
LTN1O94822 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LTN1O94822 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
LTN1O94822 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
LTN1O94822 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC21.58■■□□□ 1.04
LTN1O94822 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
LTN1O94822 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
LTN1O94822 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC21.58■■□□□ 1.04
LTN1O94822 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC21.58■■□□□ 1.04
LTN1O94822 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC21.58■■□□□ 1.04
LTN1O94822 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
LTN1O94822 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC21.58■■□□□ 1.04
LTN1O94822 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
LTN1O94822 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LTN1O94822 AC018665.1-201ENST00000622927 1362 ntBASIC21.57■■□□□ 1.04
LTN1O94822 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
LTN1O94822 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LTN1O94822 AC105020.1-201ENST00000435356 2205 ntBASIC21.57■■□□□ 1.04
LTN1O94822 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LTN1O94822 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LTN1O94822 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
LTN1O94822 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC21.57■■□□□ 1.04
LTN1O94822 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LTN1O94822 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
LTN1O94822 MIR4259-201ENST00000584466 101 ntBASIC21.57■■□□□ 1.04
LTN1O94822 BRI3BPP1-201ENST00000594224 787 ntBASIC21.57■■□□□ 1.04
LTN1O94822 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LTN1O94822 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
LTN1O94822 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LTN1O94822 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
LTN1O94822 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LTN1O94822 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.57■■□□□ 1.04
LTN1O94822 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC21.57■■□□□ 1.04
LTN1O94822 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
LTN1O94822 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.57■■□□□ 1.04
LTN1O94822 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LTN1O94822 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LTN1O94822 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LTN1O94822 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC21.56■■□□□ 1.04
LTN1O94822 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LTN1O94822 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
LTN1O94822 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC21.56■■□□□ 1.04
LTN1O94822 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
LTN1O94822 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC21.56■■□□□ 1.04
LTN1O94822 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC21.56■■□□□ 1.04
LTN1O94822 FADS2-205ENST00000517839 469 ntTSL 3 BASIC21.56■■□□□ 1.04
LTN1O94822 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC21.56■■□□□ 1.04
LTN1O94822 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
LTN1O94822 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC21.56■■□□□ 1.04
LTN1O94822 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC21.56■■□□□ 1.04
LTN1O94822 MIR5189-201ENST00000577370 114 ntBASIC21.56■■□□□ 1.04
LTN1O94822 AC015936.2-201ENST00000593177 259 ntBASIC21.56■■□□□ 1.04
LTN1O94822 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LTN1O94822 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LTN1O94822 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC21.56■■□□□ 1.04
LTN1O94822 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC21.56■■□□□ 1.04
LTN1O94822 AMT-232ENST00000636199 1546 ntTSL 5 BASIC21.56■■□□□ 1.04
LTN1O94822 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LTN1O94822 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
LTN1O94822 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC21.56■■□□□ 1.04
LTN1O94822 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.56■■□□□ 1.04
LTN1O94822 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC21.56■■□□□ 1.04
LTN1O94822 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LTN1O94822 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC21.56■■□□□ 1.04
LTN1O94822 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LTN1O94822 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LTN1O94822 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC21.56■■□□□ 1.04
LTN1O94822 AC036164.1-201ENST00000570544 333 ntBASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms