Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.98■□□□□ 0.15
CPNE3O75131 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 AP001350.2-201ENST00000625104 1094 ntBASIC15.98■□□□□ 0.15
CPNE3O75131 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
CPNE3O75131 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CPNE3O75131 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
CPNE3O75131 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CPNE3O75131 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.98■□□□□ 0.15
CPNE3O75131 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
CPNE3O75131 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.98■□□□□ 0.15
CPNE3O75131 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CPNE3O75131 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.98■□□□□ 0.15
CPNE3O75131 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE3O75131 LINC00554-201ENST00000564841 3011 ntBASIC15.97■□□□□ 0.15
CPNE3O75131 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE3O75131 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.97■□□□□ 0.15
CPNE3O75131 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CPNE3O75131 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.97■□□□□ 0.15
CPNE3O75131 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE3O75131 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CPNE3O75131 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CPNE3O75131 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE3O75131 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE3O75131 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE3O75131 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE3O75131 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE3O75131 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.97■□□□□ 0.15
CPNE3O75131 SLC25A1P3-201ENST00000395415 828 ntBASIC15.97■□□□□ 0.15
CPNE3O75131 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE3O75131 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.97■□□□□ 0.15
CPNE3O75131 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.97■□□□□ 0.15
CPNE3O75131 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE3O75131 AC005237.2-201ENST00000434368 219 ntBASIC15.97■□□□□ 0.15
CPNE3O75131 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE3O75131 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE3O75131 HLA-J-203ENST00000494367 1087 ntBASIC15.97■□□□□ 0.15
CPNE3O75131 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.97■□□□□ 0.15
CPNE3O75131 KRT8P48-201ENST00000515599 1220 ntBASIC15.97■□□□□ 0.15
CPNE3O75131 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
CPNE3O75131 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CPNE3O75131 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
CPNE3O75131 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.97■□□□□ 0.15
CPNE3O75131 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.97■□□□□ 0.15
CPNE3O75131 AC087641.1-201ENST00000557561 1021 ntBASIC15.97■□□□□ 0.15
CPNE3O75131 AL135744.1-201ENST00000565098 629 ntBASIC15.97■□□□□ 0.15
CPNE3O75131 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.97■□□□□ 0.15
CPNE3O75131 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.97■□□□□ 0.15
CPNE3O75131 AC009093.7-201ENST00000623853 1223 ntBASIC15.97■□□□□ 0.15
CPNE3O75131 AC116353.5-201ENST00000638148 1699 ntBASIC15.97■□□□□ 0.15
CPNE3O75131 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.97■□□□□ 0.15
CPNE3O75131 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CPNE3O75131 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.97■□□□□ 0.15
CPNE3O75131 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE3O75131 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.97■□□□□ 0.15
CPNE3O75131 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE3O75131 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.97■□□□□ 0.15
CPNE3O75131 AL021920.2-201ENST00000624828 1351 ntBASIC15.97■□□□□ 0.15
CPNE3O75131 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE3O75131 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE3O75131 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE3O75131 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE3O75131 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CPNE3O75131 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CPNE3O75131 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CPNE3O75131 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
CPNE3O75131 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE3O75131 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE3O75131 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE3O75131 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE3O75131 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE3O75131 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CPNE3O75131 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.96■□□□□ 0.15
CPNE3O75131 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE3O75131 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE3O75131 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE3O75131 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.96■□□□□ 0.15
CPNE3O75131 AL592309.1-201ENST00000443127 649 ntBASIC15.96■□□□□ 0.15
CPNE3O75131 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.96■□□□□ 0.15
CPNE3O75131 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.96■□□□□ 0.15
CPNE3O75131 AC079140.1-201ENST00000508039 487 ntBASIC15.96■□□□□ 0.15
CPNE3O75131 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.96■□□□□ 0.15
CPNE3O75131 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE3O75131 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE3O75131 LINC00628-201ENST00000628516 1289 ntBASIC15.96■□□□□ 0.15
CPNE3O75131 HYMAI-201ENST00000635591 3347 ntBASIC15.96■□□□□ 0.15
CPNE3O75131 FLJ38576-201ENST00000623820 2459 ntBASIC15.96■□□□□ 0.15
CPNE3O75131 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE3O75131 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CPNE3O75131 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE3O75131 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms