Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SLC28A2O43868 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC28A2O43868 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SLC28A2O43868 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.05■□□□□ 0.16
SLC28A2O43868 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SLC28A2O43868 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC28A2O43868 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SLC28A2O43868 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC28A2O43868 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC28A2O43868 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC28A2O43868 UBALD1-205ENST00000590891 2641 ntBASIC16.04■□□□□ 0.16
SLC28A2O43868 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC28A2O43868 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC28A2O43868 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC28A2O43868 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC28A2O43868 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SLC28A2O43868 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.04■□□□□ 0.16
SLC28A2O43868 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC28A2O43868 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC28A2O43868 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC28A2O43868 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.04■□□□□ 0.16
SLC28A2O43868 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.04■□□□□ 0.16
SLC28A2O43868 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC28A2O43868 KRT19P2-202ENST00000557173 1012 ntBASIC16.04■□□□□ 0.16
SLC28A2O43868 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
SLC28A2O43868 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.04■□□□□ 0.16
SLC28A2O43868 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.04■□□□□ 0.16
SLC28A2O43868 MIR6752-201ENST00000618442 71 ntBASIC16.04■□□□□ 0.16
SLC28A2O43868 AC091812.2-201ENST00000619081 385 ntBASIC16.04■□□□□ 0.16
SLC28A2O43868 AC105339.1-204ENST00000636249 355 ntBASIC16.04■□□□□ 0.16
SLC28A2O43868 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC28A2O43868 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC28A2O43868 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SLC28A2O43868 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC28A2O43868 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC28A2O43868 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC28A2O43868 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC28A2O43868 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC28A2O43868 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC28A2O43868 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC28A2O43868 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC28A2O43868 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC28A2O43868 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC28A2O43868 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC28A2O43868 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC28A2O43868 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SLC28A2O43868 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC28A2O43868 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC28A2O43868 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC28A2O43868 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC28A2O43868 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC28A2O43868 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC28A2O43868 RNF216P1-203ENST00000404404 2427 ntBASIC16.03■□□□□ 0.16
SLC28A2O43868 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC28A2O43868 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC28A2O43868 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC28A2O43868 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC28A2O43868 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC28A2O43868 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC28A2O43868 AC245100.3-201ENST00000441281 285 ntBASIC16.03■□□□□ 0.16
SLC28A2O43868 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.03■□□□□ 0.16
SLC28A2O43868 TSPY16P-201ENST00000449843 468 ntBASIC16.03■□□□□ 0.16
SLC28A2O43868 PRYP5-201ENST00000451909 266 ntBASIC16.03■□□□□ 0.16
SLC28A2O43868 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC28A2O43868 AC074386.1-202ENST00000463561 864 ntBASIC16.03■□□□□ 0.16
SLC28A2O43868 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC28A2O43868 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC28A2O43868 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.03■□□□□ 0.16
SLC28A2O43868 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SLC28A2O43868 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC28A2O43868 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.03■□□□□ 0.16
SLC28A2O43868 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SLC28A2O43868 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC28A2O43868 AC073592.4-201ENST00000623827 446 ntBASIC16.03■□□□□ 0.16
SLC28A2O43868 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SLC28A2O43868 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC28A2O43868 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC28A2O43868 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC28A2O43868 AC006504.4-201ENST00000592118 1568 ntBASIC16.03■□□□□ 0.16
SLC28A2O43868 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SLC28A2O43868 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC28A2O43868 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC28A2O43868 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC28A2O43868 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC28A2O43868 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
SLC28A2O43868 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC28A2O43868 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC28A2O43868 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC28A2O43868 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC28A2O43868 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SLC28A2O43868 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC28A2O43868 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC28A2O43868 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.02■□□□□ 0.16
SLC28A2O43868 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC28A2O43868 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC28A2O43868 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC28A2O43868 PMPCAP1-201ENST00000508114 1576 ntBASIC16.02■□□□□ 0.16
SLC28A2O43868 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.02■□□□□ 0.16
SLC28A2O43868 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC28A2O43868 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms