Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC27.86■■■□□ 2.05
CUX2O14529 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
CUX2O14529 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC27.86■■■□□ 2.05
CUX2O14529 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CUX2O14529 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC27.85■■■□□ 2.05
CUX2O14529 AC087289.5-201ENST00000586076 3175 ntBASIC27.85■■■□□ 2.05
CUX2O14529 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
CUX2O14529 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CUX2O14529 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
CUX2O14529 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
CUX2O14529 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
CUX2O14529 SOCS2P1-201ENST00000417727 557 ntBASIC27.85■■■□□ 2.05
CUX2O14529 AC069218.1-201ENST00000435269 762 ntBASIC27.85■■■□□ 2.05
CUX2O14529 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
CUX2O14529 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CUX2O14529 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC27.85■■■□□ 2.05
CUX2O14529 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC27.85■■■□□ 2.05
CUX2O14529 AC026979.3-201ENST00000607315 403 ntBASIC27.85■■■□□ 2.05
CUX2O14529 AC079336.7-201ENST00000623428 1078 ntBASIC27.85■■■□□ 2.05
CUX2O14529 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CUX2O14529 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CUX2O14529 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC27.85■■■□□ 2.05
CUX2O14529 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
CUX2O14529 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
CUX2O14529 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
CUX2O14529 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CUX2O14529 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
CUX2O14529 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
CUX2O14529 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
CUX2O14529 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC27.84■■■□□ 2.05
CUX2O14529 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CUX2O14529 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC27.84■■■□□ 2.05
CUX2O14529 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC27.84■■■□□ 2.05
CUX2O14529 CNN2P8-201ENST00000421872 913 ntBASIC27.84■■■□□ 2.05
CUX2O14529 MTX1P1-201ENST00000440904 838 ntBASIC27.84■■■□□ 2.05
CUX2O14529 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC27.84■■■□□ 2.05
CUX2O14529 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC27.84■■■□□ 2.05
CUX2O14529 CFL1-214ENST00000534769 758 ntTSL 2 BASIC27.84■■■□□ 2.05
CUX2O14529 AL359711.2-201ENST00000563105 872 ntBASIC27.84■■■□□ 2.05
CUX2O14529 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CUX2O14529 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
CUX2O14529 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CUX2O14529 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
CUX2O14529 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
CUX2O14529 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
CUX2O14529 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC27.84■■■□□ 2.05
CUX2O14529 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
CUX2O14529 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC27.84■■■□□ 2.05
CUX2O14529 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
CUX2O14529 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC27.84■■■□□ 2.05
CUX2O14529 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
CUX2O14529 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC27.84■■■□□ 2.05
CUX2O14529 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
CUX2O14529 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC27.84■■■□□ 2.05
CUX2O14529 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
CUX2O14529 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC27.84■■■□□ 2.05
CUX2O14529 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CUX2O14529 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
CUX2O14529 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CUX2O14529 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
CUX2O14529 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC27.83■■■□□ 2.05
CUX2O14529 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC27.83■■■□□ 2.05
CUX2O14529 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC27.83■■■□□ 2.05
CUX2O14529 RPL8-205ENST00000527914 551 ntTSL 3 BASIC27.83■■■□□ 2.05
CUX2O14529 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC27.83■■■□□ 2.05
CUX2O14529 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CUX2O14529 FHL2-212ENST00000607522 759 ntTSL 2 BASIC27.83■■■□□ 2.05
CUX2O14529 AP001505.2-201ENST00000616815 443 ntBASIC27.83■■■□□ 2.05
CUX2O14529 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC27.83■■■□□ 2.05
CUX2O14529 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC27.83■■■□□ 2.05
CUX2O14529 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC27.83■■■□□ 2.05
CUX2O14529 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC27.83■■■□□ 2.05
CUX2O14529 KRT8P49-201ENST00000604166 1432 ntBASIC27.83■■■□□ 2.05
CUX2O14529 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC27.83■■■□□ 2.04
CUX2O14529 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC27.83■■■□□ 2.04
CUX2O14529 AC023310.1-201ENST00000554836 735 ntBASIC27.83■■■□□ 2.04
CUX2O14529 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC27.82■■■□□ 2.04
CUX2O14529 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
CUX2O14529 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CUX2O14529 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CUX2O14529 FRMD8P1-201ENST00000440433 1524 ntBASIC27.82■■■□□ 2.04
CUX2O14529 BAATP1-201ENST00000412284 1225 ntBASIC27.82■■■□□ 2.04
CUX2O14529 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC27.82■■■□□ 2.04
CUX2O14529 MIR3907-201ENST00000579424 151 ntBASIC27.82■■■□□ 2.04
CUX2O14529 AC005357.2-202ENST00000590507 1060 ntBASIC27.82■■■□□ 2.04
CUX2O14529 CU633904.3-201ENST00000624042 1029 ntBASIC27.82■■■□□ 2.04
CUX2O14529 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CUX2O14529 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CUX2O14529 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CUX2O14529 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CUX2O14529 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CUX2O14529 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
CUX2O14529 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CUX2O14529 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CUX2O14529 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CUX2O14529 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC27.81■■■□□ 2.04
CUX2O14529 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC27.81■■■□□ 2.04
CUX2O14529 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC27.81■■■□□ 2.04
CUX2O14529 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
CUX2O14529 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms