Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.42■□□□□ 0.38
SOX1O00570 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SOX1O00570 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SOX1O00570 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.42■□□□□ 0.38
SOX1O00570 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.42■□□□□ 0.38
SOX1O00570 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SOX1O00570 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.42■□□□□ 0.38
SOX1O00570 RN7SL555P-201ENST00000584742 339 ntBASIC17.42■□□□□ 0.38
SOX1O00570 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.42■□□□□ 0.38
SOX1O00570 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.42■□□□□ 0.38
SOX1O00570 CASP16P-204ENST00000635032 809 ntBASIC17.42■□□□□ 0.38
SOX1O00570 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SOX1O00570 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SOX1O00570 AL031598.1-201ENST00000561511 1773 ntBASIC17.42■□□□□ 0.38
SOX1O00570 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.42■□□□□ 0.38
SOX1O00570 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SOX1O00570 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.42■□□□□ 0.38
SOX1O00570 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SOX1O00570 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SOX1O00570 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
SOX1O00570 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SOX1O00570 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SOX1O00570 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.42■□□□□ 0.38
SOX1O00570 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SOX1O00570 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.41■□□□□ 0.38
SOX1O00570 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SOX1O00570 AC087289.5-201ENST00000586076 3175 ntBASIC17.41■□□□□ 0.38
SOX1O00570 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SOX1O00570 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SOX1O00570 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SOX1O00570 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SOX1O00570 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SOX1O00570 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SOX1O00570 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SOX1O00570 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.41■□□□□ 0.38
SOX1O00570 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SOX1O00570 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.41■□□□□ 0.38
SOX1O00570 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.41■□□□□ 0.38
SOX1O00570 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SOX1O00570 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SOX1O00570 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.41■□□□□ 0.38
SOX1O00570 RPL13AP19-201ENST00000434320 584 ntBASIC17.41■□□□□ 0.38
SOX1O00570 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SOX1O00570 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.41■□□□□ 0.38
SOX1O00570 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.41■□□□□ 0.38
SOX1O00570 AC036164.1-201ENST00000570544 333 ntBASIC17.41■□□□□ 0.38
SOX1O00570 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.41■□□□□ 0.38
SOX1O00570 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SOX1O00570 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SOX1O00570 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.41■□□□□ 0.38
SOX1O00570 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SOX1O00570 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.41■□□□□ 0.38
SOX1O00570 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SOX1O00570 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SOX1O00570 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SOX1O00570 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.41■□□□□ 0.38
SOX1O00570 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.41■□□□□ 0.38
SOX1O00570 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SOX1O00570 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.41■□□□□ 0.38
SOX1O00570 CROCCP3-202ENST00000420820 1947 ntBASIC17.41■□□□□ 0.38
SOX1O00570 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
SOX1O00570 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SOX1O00570 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 BCL2-203ENST00000589955 5011 ntBASIC17.4■□□□□ 0.38
SOX1O00570 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.4■□□□□ 0.38
SOX1O00570 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SOX1O00570 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 BAATP1-201ENST00000412284 1225 ntBASIC17.4■□□□□ 0.38
SOX1O00570 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.4■□□□□ 0.38
SOX1O00570 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.4■□□□□ 0.38
SOX1O00570 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.4■□□□□ 0.38
SOX1O00570 RN7SL720P-201ENST00000488178 304 ntBASIC17.4■□□□□ 0.38
SOX1O00570 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.4■□□□□ 0.38
SOX1O00570 EEF1DP1-201ENST00000585891 896 ntBASIC17.4■□□□□ 0.38
SOX1O00570 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.4■□□□□ 0.38
SOX1O00570 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.4■□□□□ 0.38
SOX1O00570 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 AC026979.3-201ENST00000607315 403 ntBASIC17.4■□□□□ 0.38
SOX1O00570 AL158212.4-201ENST00000624062 1286 ntBASIC17.4■□□□□ 0.38
SOX1O00570 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SOX1O00570 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SOX1O00570 AC135776.1-201ENST00000319817 2481 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms