Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHL1O00533 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.16■□□□□ 0.98
CHL1O00533 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CHL1O00533 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CHL1O00533 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC21.16■□□□□ 0.98
CHL1O00533 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC21.16■□□□□ 0.98
CHL1O00533 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC21.16■□□□□ 0.98
CHL1O00533 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHL1O00533 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHL1O00533 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHL1O00533 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHL1O00533 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHL1O00533 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHL1O00533 MIR943-201ENST00000401286 94 ntBASIC21.16■□□□□ 0.98
CHL1O00533 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC21.16■□□□□ 0.98
CHL1O00533 AC097493.3-201ENST00000509725 367 ntBASIC21.16■□□□□ 0.98
CHL1O00533 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.16■□□□□ 0.98
CHL1O00533 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC21.16■□□□□ 0.98
CHL1O00533 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CHL1O00533 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CHL1O00533 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHL1O00533 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.16■□□□□ 0.98
CHL1O00533 AC009053.2-201ENST00000563701 2365 ntBASIC21.16■□□□□ 0.98
CHL1O00533 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHL1O00533 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CHL1O00533 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC21.16■□□□□ 0.98
CHL1O00533 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHL1O00533 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHL1O00533 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHL1O00533 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHL1O00533 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHL1O00533 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CHL1O00533 AL592424.1-201ENST00000563624 1536 ntBASIC21.15■□□□□ 0.98
CHL1O00533 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHL1O00533 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CHL1O00533 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHL1O00533 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHL1O00533 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHL1O00533 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHL1O00533 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHL1O00533 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHL1O00533 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHL1O00533 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.15■□□□□ 0.98
CHL1O00533 TREML5P-201ENST00000421694 576 ntBASIC21.15■□□□□ 0.98
CHL1O00533 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHL1O00533 CCDC74BP1-201ENST00000508880 1123 ntBASIC21.15■□□□□ 0.98
CHL1O00533 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC21.15■□□□□ 0.98
CHL1O00533 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.15■□□□□ 0.98
CHL1O00533 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC21.15■□□□□ 0.98
CHL1O00533 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
CHL1O00533 AL158211.3-201ENST00000607385 239 ntBASIC21.15■□□□□ 0.98
CHL1O00533 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHL1O00533 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CHL1O00533 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC21.15■□□□□ 0.98
CHL1O00533 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC21.15■□□□□ 0.98
CHL1O00533 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC21.15■□□□□ 0.98
CHL1O00533 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC21.15■□□□□ 0.98
CHL1O00533 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHL1O00533 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC21.15■□□□□ 0.98
CHL1O00533 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.15■□□□□ 0.98
CHL1O00533 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.14■□□□□ 0.98
CHL1O00533 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC21.14■□□□□ 0.98
CHL1O00533 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC21.14■□□□□ 0.98
CHL1O00533 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHL1O00533 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC21.14■□□□□ 0.98
CHL1O00533 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHL1O00533 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
CHL1O00533 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CHL1O00533 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHL1O00533 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHL1O00533 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC21.14■□□□□ 0.97
CHL1O00533 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.14■□□□□ 0.97
CHL1O00533 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC21.14■□□□□ 0.97
CHL1O00533 SATB1-217ENST00000493952 626 ntTSL 3 BASIC21.14■□□□□ 0.97
CHL1O00533 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHL1O00533 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHL1O00533 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC21.14■□□□□ 0.97
CHL1O00533 AC105021.1-202ENST00000570572 669 ntBASIC21.14■□□□□ 0.97
CHL1O00533 LITAF-210ENST00000571976 548 ntTSL 2 BASIC21.14■□□□□ 0.97
CHL1O00533 LITAF-214ENST00000574703 486 ntTSL 2 BASIC21.14■□□□□ 0.97
CHL1O00533 AC024267.1-201ENST00000582320 895 ntBASIC21.14■□□□□ 0.97
CHL1O00533 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHL1O00533 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.14■□□□□ 0.97
CHL1O00533 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHL1O00533 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHL1O00533 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.14■□□□□ 0.97
CHL1O00533 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC21.14■□□□□ 0.97
CHL1O00533 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
CHL1O00533 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
CHL1O00533 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CHL1O00533 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHL1O00533 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CHL1O00533 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC21.13■□□□□ 0.97
CHL1O00533 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC21.13■□□□□ 0.97
CHL1O00533 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CHL1O00533 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHL1O00533 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC21.13■□□□□ 0.97
CHL1O00533 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHL1O00533 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CHL1O00533 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms