Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
FOXN3O00409 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
FOXN3O00409 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.77■□□□□ 0.43
FOXN3O00409 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.77■□□□□ 0.43
FOXN3O00409 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.77■□□□□ 0.43
FOXN3O00409 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXN3O00409 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN3O00409 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
FOXN3O00409 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN3O00409 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN3O00409 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN3O00409 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN3O00409 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN3O00409 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
FOXN3O00409 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN3O00409 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN3O00409 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXN3O00409 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
FOXN3O00409 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN3O00409 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.76■□□□□ 0.43
FOXN3O00409 KRT18P2-201ENST00000447938 1258 ntBASIC17.76■□□□□ 0.43
FOXN3O00409 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXN3O00409 POU5F1P6-201ENST00000466990 990 ntBASIC17.76■□□□□ 0.43
FOXN3O00409 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXN3O00409 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXN3O00409 AL031055.1-201ENST00000606362 631 ntBASIC17.76■□□□□ 0.43
FOXN3O00409 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXN3O00409 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.76■□□□□ 0.43
FOXN3O00409 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN3O00409 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN3O00409 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN3O00409 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN3O00409 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
FOXN3O00409 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXN3O00409 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN3O00409 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN3O00409 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN3O00409 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN3O00409 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
FOXN3O00409 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.76■□□□□ 0.43
FOXN3O00409 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
FOXN3O00409 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN3O00409 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
FOXN3O00409 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
FOXN3O00409 IL9RP2-201ENST00000423948 1312 ntBASIC17.75■□□□□ 0.43
FOXN3O00409 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN3O00409 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN3O00409 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN3O00409 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.75■□□□□ 0.43
FOXN3O00409 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN3O00409 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN3O00409 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
FOXN3O00409 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.75■□□□□ 0.43
FOXN3O00409 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXN3O00409 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN3O00409 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
FOXN3O00409 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.75■□□□□ 0.43
FOXN3O00409 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXN3O00409 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.75■□□□□ 0.43
FOXN3O00409 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
FOXN3O00409 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXN3O00409 AC006449.6-201ENST00000612330 2296 ntBASIC17.75■□□□□ 0.43
FOXN3O00409 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN3O00409 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN3O00409 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
FOXN3O00409 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FOXN3O00409 REXO1L8P-201ENST00000604378 1897 ntBASIC17.75■□□□□ 0.43
FOXN3O00409 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.75■□□□□ 0.43
FOXN3O00409 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN3O00409 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN3O00409 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN3O00409 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN3O00409 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN3O00409 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXN3O00409 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN3O00409 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN3O00409 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
FOXN3O00409 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXN3O00409 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
FOXN3O00409 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN3O00409 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN3O00409 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXN3O00409 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN3O00409 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN3O00409 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXN3O00409 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.74■□□□□ 0.43
FOXN3O00409 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN3O00409 PMS2P4-201ENST00000412466 1052 ntBASIC17.74■□□□□ 0.43
FOXN3O00409 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.74■□□□□ 0.43
FOXN3O00409 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXN3O00409 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
FOXN3O00409 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.74■□□□□ 0.43
FOXN3O00409 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FOXN3O00409 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.74■□□□□ 0.43
FOXN3O00409 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXN3O00409 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXN3O00409 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.74■□□□□ 0.43
FOXN3O00409 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.74■□□□□ 0.43
FOXN3O00409 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
FOXN3O00409 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms