Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 SLC25A6P2-201ENST00000497974 877 ntBASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 AC009093.7-201ENST00000623853 1223 ntBASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 AKAP8P1-201ENST00000434743 1349 ntBASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TMX2-CTNND1H3BSU7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 AL355306.1-201ENST00000415580 579 ntBASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 AL627223.1-201ENST00000416693 442 ntBASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 MIR4515-201ENST00000584082 81 ntBASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 PAUPAR-201ENST00000630360 2965 ntBASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMX2-CTNND1H3BSU7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.33■□□□□ 0.21
TMX2-CTNND1H3BSU7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.33■□□□□ 0.21
TMX2-CTNND1H3BSU7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TMX2-CTNND1H3BSU7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TMX2-CTNND1H3BSU7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
TMX2-CTNND1H3BSU7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
TMX2-CTNND1H3BSU7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 AL603756.1-201ENST00000606511 2163 ntBASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 AC092474.2-201ENST00000424288 719 ntBASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 ADH5P3-201ENST00000433842 1137 ntBASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.33■□□□□ 0.2
TMX2-CTNND1H3BSU7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms