Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.48□□□□□ -0.09
MBD3L3A6NE82 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 SERBP1P5-201ENST00000510079 1181 ntBASIC14.47□□□□□ -0.09
MBD3L3A6NE82 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
MBD3L3A6NE82 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.46□□□□□ -0.09
MBD3L3A6NE82 AC015922.1-201ENST00000421102 1152 ntBASIC14.46□□□□□ -0.09
MBD3L3A6NE82 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.46□□□□□ -0.09
MBD3L3A6NE82 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 ZNF890P-202ENST00000530367 1156 ntBASIC14.46□□□□□ -0.09
MBD3L3A6NE82 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.46□□□□□ -0.09
MBD3L3A6NE82 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MBD3L3A6NE82 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
MBD3L3A6NE82 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
MBD3L3A6NE82 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
MBD3L3A6NE82 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.46□□□□□ -0.1
MBD3L3A6NE82 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.46□□□□□ -0.1
MBD3L3A6NE82 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.46□□□□□ -0.1
MBD3L3A6NE82 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.46□□□□□ -0.1
MBD3L3A6NE82 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
MBD3L3A6NE82 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms