Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 TP73-AS1-210ENST00000637775 1455 ntBASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 SIGLEC16-201ENST00000599858 1437 ntBASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 AP000867.4-201ENST00000641616 219 ntBASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 INTS4P1-201ENST00000438455 1935 ntBASIC15.55■□□□□ 0.08
TCRBV3S1A0A5B6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 TSPY5P-201ENST00000426936 936 ntBASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 AC083849.1-201ENST00000615227 514 ntBASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.54■□□□□ 0.08
TCRBV3S1A0A5B6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 CICP24-201ENST00000605464 2705 ntBASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TCRBV3S1A0A5B6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms