Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 PMS2P4-201ENST00000412466 1052 ntBASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 AL355994.1-201ENST00000424379 260 ntBASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDHB13Q9Y5F0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHB13Q9Y5F0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.39■□□□□ 0.54
PCDHB13Q9Y5F0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
PCDHB13Q9Y5F0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 RNU1-129P-201ENST00000384064 167 ntBASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 MIR3909-201ENST00000579518 119 ntBASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 U1.21-201ENST00000580816 167 ntBASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDHB13Q9Y5F0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 MIR940-201ENST00000401276 94 ntBASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 AC007919.2-201ENST00000444110 511 ntBASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 AC005972.3-201ENST00000606304 481 ntBASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.38■□□□□ 0.53
PCDHB13Q9Y5F0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB13Q9Y5F0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms