Protein–RNA interactions for Protein: Q9P2E5

CHPF2, Chondroitin sulfate glucuronyltransferase, humanhuman

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2Q9P2E5 RNA5SP410-201ENST00000516285 106 ntBASIC20.98■□□□□ 0.95
CHPF2Q9P2E5 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC20.98■□□□□ 0.95
CHPF2Q9P2E5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC20.98■□□□□ 0.95
CHPF2Q9P2E5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CHPF2Q9P2E5 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20.98■□□□□ 0.95
CHPF2Q9P2E5 SPDYE12P-201ENST00000618416 771 ntBASIC20.98■□□□□ 0.95
CHPF2Q9P2E5 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.98■□□□□ 0.95
CHPF2Q9P2E5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHPF2Q9P2E5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHPF2Q9P2E5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.98■□□□□ 0.95
CHPF2Q9P2E5 PCGF3-213ENST00000620529 1899 ntBASIC20.98■□□□□ 0.95
CHPF2Q9P2E5 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHPF2Q9P2E5 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHPF2Q9P2E5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHPF2Q9P2E5 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHPF2Q9P2E5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.98■□□□□ 0.95
CHPF2Q9P2E5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 BASP1P1-201ENST00000430708 665 ntBASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 AL589702.1-201ENST00000641229 1509 ntBASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.97■□□□□ 0.95
CHPF2Q9P2E5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 AJ011932.1-201ENST00000621707 465 ntBASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHPF2Q9P2E5 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 MIR661-201ENST00000384842 89 ntBASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 INGX-202ENST00000489074 768 ntBASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 RNA5SP421-201ENST00000516864 134 ntBASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 FLJ38576-201ENST00000623820 2459 ntBASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.95■□□□□ 0.94
CHPF2Q9P2E5 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHPF2Q9P2E5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHPF2Q9P2E5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHPF2Q9P2E5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHPF2Q9P2E5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHPF2Q9P2E5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHPF2Q9P2E5 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHPF2Q9P2E5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.94■□□□□ 0.94
CHPF2Q9P2E5 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC20.94■□□□□ 0.94
CHPF2Q9P2E5 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CHPF2Q9P2E5 MIR4745-201ENST00000577608 62 ntBASIC20.94■□□□□ 0.94
CHPF2Q9P2E5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHPF2Q9P2E5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
CHPF2Q9P2E5 AL138828.2-201ENST00000615812 383 ntBASIC20.94■□□□□ 0.94
CHPF2Q9P2E5 AC073592.8-201ENST00000624126 511 ntBASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms