Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.15■□□□□ 0.18
NDE1Q9NXR1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 KRT8P49-201ENST00000604166 1432 ntBASIC16.15■□□□□ 0.18
NDE1Q9NXR1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 AL161772.1-201ENST00000610494 4412 ntBASIC16.15■□□□□ 0.18
NDE1Q9NXR1 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.15■□□□□ 0.18
NDE1Q9NXR1 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NDE1Q9NXR1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 AP005117.1-202ENST00000581724 1908 ntBASIC16.14■□□□□ 0.17
NDE1Q9NXR1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.14■□□□□ 0.17
NDE1Q9NXR1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.14■□□□□ 0.17
NDE1Q9NXR1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 AL138966.2-201ENST00000621997 464 ntBASIC16.14■□□□□ 0.17
NDE1Q9NXR1 AC006277.1-201ENST00000624348 1610 ntBASIC16.14■□□□□ 0.17
NDE1Q9NXR1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NDE1Q9NXR1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.13■□□□□ 0.17
NDE1Q9NXR1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 SPDYE15P-201ENST00000424157 909 ntBASIC16.13■□□□□ 0.17
NDE1Q9NXR1 AL359075.1-203ENST00000462729 1002 ntBASIC16.13■□□□□ 0.17
NDE1Q9NXR1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 AL138831.2-201ENST00000606564 490 ntBASIC16.13■□□□□ 0.17
NDE1Q9NXR1 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms