Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.51■□□□□ 0.39
TLR9Q9NR96 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.51■□□□□ 0.39
TLR9Q9NR96 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.51■□□□□ 0.39
TLR9Q9NR96 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.51■□□□□ 0.39
TLR9Q9NR96 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.51■□□□□ 0.39
TLR9Q9NR96 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.51■□□□□ 0.39
TLR9Q9NR96 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TLR9Q9NR96 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TLR9Q9NR96 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TLR9Q9NR96 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TLR9Q9NR96 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.51■□□□□ 0.39
TLR9Q9NR96 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TLR9Q9NR96 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.51■□□□□ 0.39
TLR9Q9NR96 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TLR9Q9NR96 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.51■□□□□ 0.39
TLR9Q9NR96 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TLR9Q9NR96 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TLR9Q9NR96 AL671710.1-201ENST00000610245 2349 ntBASIC17.5■□□□□ 0.39
TLR9Q9NR96 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TLR9Q9NR96 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.5■□□□□ 0.39
TLR9Q9NR96 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
TLR9Q9NR96 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TLR9Q9NR96 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TLR9Q9NR96 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TLR9Q9NR96 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TLR9Q9NR96 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.5■□□□□ 0.39
TLR9Q9NR96 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TLR9Q9NR96 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.5■□□□□ 0.39
TLR9Q9NR96 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TLR9Q9NR96 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TLR9Q9NR96 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TLR9Q9NR96 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TLR9Q9NR96 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.5■□□□□ 0.39
TLR9Q9NR96 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TLR9Q9NR96 AL512384.1-201ENST00000406683 331 ntBASIC17.5■□□□□ 0.39
TLR9Q9NR96 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.5■□□□□ 0.39
TLR9Q9NR96 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
TLR9Q9NR96 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.5■□□□□ 0.39
TLR9Q9NR96 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TLR9Q9NR96 AC093004.1-201ENST00000508850 424 ntBASIC17.5■□□□□ 0.39
TLR9Q9NR96 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.5■□□□□ 0.39
TLR9Q9NR96 DOC2GP-202ENST00000514950 1163 ntBASIC17.5■□□□□ 0.39
TLR9Q9NR96 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.5■□□□□ 0.39
TLR9Q9NR96 AC010336.2-201ENST00000564226 506 ntBASIC17.5■□□□□ 0.39
TLR9Q9NR96 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.5■□□□□ 0.39
TLR9Q9NR96 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.5■□□□□ 0.39
TLR9Q9NR96 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TLR9Q9NR96 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.5■□□□□ 0.39
TLR9Q9NR96 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TLR9Q9NR96 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TLR9Q9NR96 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.5■□□□□ 0.39
TLR9Q9NR96 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TLR9Q9NR96 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TLR9Q9NR96 AC006277.1-201ENST00000624348 1610 ntBASIC17.5■□□□□ 0.39
TLR9Q9NR96 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TLR9Q9NR96 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TLR9Q9NR96 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TLR9Q9NR96 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TLR9Q9NR96 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TLR9Q9NR96 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TLR9Q9NR96 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TLR9Q9NR96 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TLR9Q9NR96 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TLR9Q9NR96 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TLR9Q9NR96 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TLR9Q9NR96 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TLR9Q9NR96 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.49■□□□□ 0.39
TLR9Q9NR96 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TLR9Q9NR96 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TLR9Q9NR96 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TLR9Q9NR96 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.49■□□□□ 0.39
TLR9Q9NR96 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TLR9Q9NR96 SPDYE19P-201ENST00000338590 713 ntBASIC17.49■□□□□ 0.39
TLR9Q9NR96 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.49■□□□□ 0.39
TLR9Q9NR96 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TLR9Q9NR96 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.49■□□□□ 0.39
TLR9Q9NR96 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.49■□□□□ 0.39
TLR9Q9NR96 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TLR9Q9NR96 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.49■□□□□ 0.39
TLR9Q9NR96 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TLR9Q9NR96 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.49■□□□□ 0.39
TLR9Q9NR96 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.49■□□□□ 0.39
TLR9Q9NR96 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.49■□□□□ 0.39
TLR9Q9NR96 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.49■□□□□ 0.39
TLR9Q9NR96 AC011495.1-201ENST00000498085 584 ntBASIC17.49■□□□□ 0.39
TLR9Q9NR96 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.49■□□□□ 0.39
TLR9Q9NR96 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TLR9Q9NR96 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TLR9Q9NR96 AC124947.2-201ENST00000547118 1133 ntBASIC17.49■□□□□ 0.39
TLR9Q9NR96 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TLR9Q9NR96 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TLR9Q9NR96 AC013467.2-201ENST00000605472 835 ntBASIC17.49■□□□□ 0.39
TLR9Q9NR96 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.49■□□□□ 0.39
TLR9Q9NR96 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TLR9Q9NR96 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TLR9Q9NR96 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TLR9Q9NR96 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.49■□□□□ 0.39
TLR9Q9NR96 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TLR9Q9NR96 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.49■□□□□ 0.39
TLR9Q9NR96 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms