Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
CHD8Q9HCK8 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CHD8Q9HCK8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CHD8Q9HCK8 AC093433.1-201ENST00000458048 571 ntBASIC15.16■□□□□ 0.02
CHD8Q9HCK8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.16■□□□□ 0.02
CHD8Q9HCK8 AC061975.2-201ENST00000581722 295 ntBASIC15.16■□□□□ 0.02
CHD8Q9HCK8 AC132192.2-201ENST00000596206 1147 ntBASIC15.16■□□□□ 0.02
CHD8Q9HCK8 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.16■□□□□ 0.02
CHD8Q9HCK8 YRDCP1-201ENST00000621419 643 ntBASIC15.16■□□□□ 0.02
CHD8Q9HCK8 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHD8Q9HCK8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CHD8Q9HCK8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 MIR769-201ENST00000390225 118 ntBASIC15.15■□□□□ 0.02
CHD8Q9HCK8 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 RN7SL181P-201ENST00000462921 277 ntBASIC15.15■□□□□ 0.02
CHD8Q9HCK8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 AL031598.1-201ENST00000561511 1773 ntBASIC15.15■□□□□ 0.02
CHD8Q9HCK8 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.15■□□□□ 0.02
CHD8Q9HCK8 AL049840.4-201ENST00000602422 811 ntBASIC15.15■□□□□ 0.02
CHD8Q9HCK8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 AC010503.4-201ENST00000615487 688 ntBASIC15.15■□□□□ 0.02
CHD8Q9HCK8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 CNN2P8-201ENST00000421872 913 ntBASIC15.15■□□□□ 0.02
CHD8Q9HCK8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 PRKXP1-201ENST00000561423 1122 ntBASIC15.15■□□□□ 0.02
CHD8Q9HCK8 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 RN7SL736P-201ENST00000613111 269 ntBASIC15.15■□□□□ 0.02
CHD8Q9HCK8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CHD8Q9HCK8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 AC044849.1-201ENST00000519737 1188 ntBASIC15.14■□□□□ 0.01
CHD8Q9HCK8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 AC015818.8-201ENST00000587907 1519 ntBASIC15.14■□□□□ 0.01
CHD8Q9HCK8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 RPSAP36-202ENST00000494591 1261 ntBASIC15.14■□□□□ 0.01
CHD8Q9HCK8 AC009486.1-201ENST00000569860 813 ntBASIC15.14■□□□□ 0.01
CHD8Q9HCK8 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CHD8Q9HCK8 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 AC006001.1-201ENST00000325130 474 ntBASIC15.13■□□□□ 0.01
CHD8Q9HCK8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CHD8Q9HCK8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms