Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 AC123567.1-201ENST00000548294 1261 ntBASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 MIR4259-201ENST00000584466 101 ntBASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 AC020765.3-201ENST00000613051 740 ntBASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 MIR6069-201ENST00000620069 79 ntBASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 AL109936.8-201ENST00000641772 604 ntBASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.95■□□□□ 0.78
RTFDC1Q9BY42 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 RRP7BP-205ENST00000566851 833 ntBASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 AC093726.1-201ENST00000608064 963 ntBASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RTFDC1Q9BY42 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
RTFDC1Q9BY42 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms