Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 AC078925.2-201ENST00000624013 1973 ntBASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAF4Q9BUZ4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 AC055717.3-201ENST00000622967 595 ntBASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 AC006504.4-201ENST00000592118 1568 ntBASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAF4Q9BUZ4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 AC100803.2-201ENST00000562459 1963 ntBASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 IGHV3-52-201ENST00000519770 353 ntBASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 STK25P1-201ENST00000585406 838 ntBASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 PAUPAR-201ENST00000630360 2965 ntBASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF4Q9BUZ4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF4Q9BUZ4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms