Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLF1Q9BQI6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLF1Q9BQI6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLF1Q9BQI6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.28■□□□□ 0.68
SLF1Q9BQI6 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.28■□□□□ 0.68
SLF1Q9BQI6 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.28■□□□□ 0.68
SLF1Q9BQI6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLF1Q9BQI6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.28■□□□□ 0.68
SLF1Q9BQI6 RNA5SP421-201ENST00000516864 134 ntBASIC19.28■□□□□ 0.68
SLF1Q9BQI6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.28■□□□□ 0.68
SLF1Q9BQI6 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.28■□□□□ 0.68
SLF1Q9BQI6 AC140878.1-201ENST00000565277 250 ntBASIC19.28■□□□□ 0.68
SLF1Q9BQI6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.28■□□□□ 0.68
SLF1Q9BQI6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.28■□□□□ 0.68
SLF1Q9BQI6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLF1Q9BQI6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLF1Q9BQI6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLF1Q9BQI6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLF1Q9BQI6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLF1Q9BQI6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLF1Q9BQI6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.28■□□□□ 0.68
SLF1Q9BQI6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 AC006277.1-201ENST00000624348 1610 ntBASIC19.27■□□□□ 0.68
SLF1Q9BQI6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 AC013467.2-201ENST00000605472 835 ntBASIC19.27■□□□□ 0.68
SLF1Q9BQI6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SLF1Q9BQI6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SLF1Q9BQI6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLF1Q9BQI6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 AC092068.3-201ENST00000587894 2016 ntBASIC19.26■□□□□ 0.67
SLF1Q9BQI6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 AC142381.1-201ENST00000426099 345 ntBASIC19.26■□□□□ 0.67
SLF1Q9BQI6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 AC105233.2-201ENST00000523697 349 ntBASIC19.26■□□□□ 0.67
SLF1Q9BQI6 AF228730.5-201ENST00000530288 346 ntBASIC19.26■□□□□ 0.67
SLF1Q9BQI6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.26■□□□□ 0.67
SLF1Q9BQI6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SLF1Q9BQI6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms