Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.22■□□□□ 0.19
PRPF18Q99633 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.22■□□□□ 0.19
PRPF18Q99633 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.22■□□□□ 0.19
PRPF18Q99633 NUS1P1-201ENST00000446295 882 ntBASIC16.22■□□□□ 0.19
PRPF18Q99633 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.22■□□□□ 0.19
PRPF18Q99633 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.22■□□□□ 0.19
PRPF18Q99633 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.22■□□□□ 0.19
PRPF18Q99633 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.22■□□□□ 0.19
PRPF18Q99633 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.22■□□□□ 0.19
PRPF18Q99633 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PRPF18Q99633 AC010331.1-201ENST00000611423 582 ntBASIC16.22■□□□□ 0.19
PRPF18Q99633 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.22■□□□□ 0.19
PRPF18Q99633 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.22■□□□□ 0.19
PRPF18Q99633 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PRPF18Q99633 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 C8orf49-201ENST00000525043 1968 ntBASIC16.22■□□□□ 0.19
PRPF18Q99633 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PRPF18Q99633 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.22■□□□□ 0.19
PRPF18Q99633 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
PRPF18Q99633 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PRPF18Q99633 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
PRPF18Q99633 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRPF18Q99633 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
PRPF18Q99633 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRPF18Q99633 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.21■□□□□ 0.19
PRPF18Q99633 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRPF18Q99633 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRPF18Q99633 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.21■□□□□ 0.19
PRPF18Q99633 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PRPF18Q99633 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRPF18Q99633 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.21■□□□□ 0.19
PRPF18Q99633 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
PRPF18Q99633 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRPF18Q99633 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PRPF18Q99633 AC079776.2-201ENST00000641154 1609 ntBASIC16.21■□□□□ 0.19
PRPF18Q99633 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PRPF18Q99633 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.21■□□□□ 0.19
PRPF18Q99633 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRPF18Q99633 LINC00982-205ENST00000420957 435 ntBASIC16.21■□□□□ 0.19
PRPF18Q99633 ATP5G2P1-201ENST00000433580 426 ntBASIC16.21■□□□□ 0.19
PRPF18Q99633 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.21■□□□□ 0.19
PRPF18Q99633 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.21■□□□□ 0.19
PRPF18Q99633 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.21■□□□□ 0.19
PRPF18Q99633 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.21■□□□□ 0.19
PRPF18Q99633 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.21■□□□□ 0.19
PRPF18Q99633 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.21■□□□□ 0.19
PRPF18Q99633 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.21■□□□□ 0.19
PRPF18Q99633 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.21■□□□□ 0.19
PRPF18Q99633 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.21■□□□□ 0.19
PRPF18Q99633 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRPF18Q99633 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.21■□□□□ 0.19
PRPF18Q99633 AC073592.4-201ENST00000623827 446 ntBASIC16.21■□□□□ 0.19
PRPF18Q99633 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PRPF18Q99633 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.21■□□□□ 0.19
PRPF18Q99633 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRPF18Q99633 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRPF18Q99633 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRPF18Q99633 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRPF18Q99633 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRPF18Q99633 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.21■□□□□ 0.19
PRPF18Q99633 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PRPF18Q99633 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PRPF18Q99633 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.21■□□□□ 0.19
PRPF18Q99633 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRPF18Q99633 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.21■□□□□ 0.18
PRPF18Q99633 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
PRPF18Q99633 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.21■□□□□ 0.18
PRPF18Q99633 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.21■□□□□ 0.18
PRPF18Q99633 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PRPF18Q99633 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PRPF18Q99633 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
PRPF18Q99633 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.21■□□□□ 0.18
PRPF18Q99633 AC126177.1-201ENST00000547829 2218 ntBASIC16.21■□□□□ 0.18
PRPF18Q99633 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PRPF18Q99633 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRPF18Q99633 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRPF18Q99633 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PRPF18Q99633 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRPF18Q99633 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.2■□□□□ 0.18
PRPF18Q99633 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.2■□□□□ 0.18
PRPF18Q99633 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRPF18Q99633 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRPF18Q99633 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PRPF18Q99633 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRPF18Q99633 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.2■□□□□ 0.18
PRPF18Q99633 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PRPF18Q99633 NUS1P2-201ENST00000417358 873 ntBASIC16.2■□□□□ 0.18
PRPF18Q99633 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms