Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NEK1Q96PY6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NEK1Q96PY6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NEK1Q96PY6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NEK1Q96PY6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NEK1Q96PY6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NEK1Q96PY6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.65■□□□□ 0.74
NEK1Q96PY6 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NEK1Q96PY6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NEK1Q96PY6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.64■□□□□ 0.74
NEK1Q96PY6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NEK1Q96PY6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
NEK1Q96PY6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.64■□□□□ 0.74
NEK1Q96PY6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NEK1Q96PY6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.64■□□□□ 0.74
NEK1Q96PY6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NEK1Q96PY6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
NEK1Q96PY6 AC018695.7-201ENST00000624587 2492 ntBASIC19.64■□□□□ 0.74
NEK1Q96PY6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NEK1Q96PY6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NEK1Q96PY6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NEK1Q96PY6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NEK1Q96PY6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NEK1Q96PY6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NEK1Q96PY6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NEK1Q96PY6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NEK1Q96PY6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NEK1Q96PY6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.64■□□□□ 0.73
NEK1Q96PY6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.64■□□□□ 0.73
NEK1Q96PY6 AL009183.1-201ENST00000603760 355 ntBASIC19.64■□□□□ 0.73
NEK1Q96PY6 AC140113.2-201ENST00000604370 208 ntBASIC19.64■□□□□ 0.73
NEK1Q96PY6 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.64■□□□□ 0.73
NEK1Q96PY6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NEK1Q96PY6 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NEK1Q96PY6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
NEK1Q96PY6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NEK1Q96PY6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.64■□□□□ 0.73
NEK1Q96PY6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NEK1Q96PY6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NEK1Q96PY6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NEK1Q96PY6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.64■□□□□ 0.73
NEK1Q96PY6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.64■□□□□ 0.73
NEK1Q96PY6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NEK1Q96PY6 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NEK1Q96PY6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEK1Q96PY6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEK1Q96PY6 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NEK1Q96PY6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NEK1Q96PY6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.63■□□□□ 0.73
NEK1Q96PY6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEK1Q96PY6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEK1Q96PY6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.63■□□□□ 0.73
NEK1Q96PY6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NEK1Q96PY6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.63■□□□□ 0.73
NEK1Q96PY6 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEK1Q96PY6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.63■□□□□ 0.73
NEK1Q96PY6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.63■□□□□ 0.73
NEK1Q96PY6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEK1Q96PY6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NEK1Q96PY6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEK1Q96PY6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NEK1Q96PY6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.63■□□□□ 0.73
NEK1Q96PY6 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.63■□□□□ 0.73
NEK1Q96PY6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.63■□□□□ 0.73
NEK1Q96PY6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.63■□□□□ 0.73
NEK1Q96PY6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.63■□□□□ 0.73
NEK1Q96PY6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.63■□□□□ 0.73
NEK1Q96PY6 AC027601.4-201ENST00000611259 610 ntBASIC19.63■□□□□ 0.73
NEK1Q96PY6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
NEK1Q96PY6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEK1Q96PY6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.63■□□□□ 0.73
NEK1Q96PY6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEK1Q96PY6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEK1Q96PY6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.63■□□□□ 0.73
NEK1Q96PY6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.63■□□□□ 0.73
NEK1Q96PY6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 MTHFR-217ENST00000641820 1569 ntBASIC19.62■□□□□ 0.73
NEK1Q96PY6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK1Q96PY6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.62■□□□□ 0.73
NEK1Q96PY6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms