Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL21A1Q96P44 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL21A1Q96P44 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL21A1Q96P44 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.76■□□□□ 0.11
COL21A1Q96P44 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
COL21A1Q96P44 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
COL21A1Q96P44 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
COL21A1Q96P44 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.76■□□□□ 0.11
COL21A1Q96P44 GGTLC5P-201ENST00000617623 998 ntBASIC15.76■□□□□ 0.11
COL21A1Q96P44 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
COL21A1Q96P44 AC117500.6-201ENST00000624871 588 ntBASIC15.76■□□□□ 0.11
COL21A1Q96P44 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.76■□□□□ 0.11
COL21A1Q96P44 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
COL21A1Q96P44 AF228730.7-201ENST00000641842 219 ntBASIC15.76■□□□□ 0.11
COL21A1Q96P44 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL21A1Q96P44 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.76■□□□□ 0.11
COL21A1Q96P44 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL21A1Q96P44 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL21A1Q96P44 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
COL21A1Q96P44 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL21A1Q96P44 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL21A1Q96P44 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL21A1Q96P44 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL21A1Q96P44 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL21A1Q96P44 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.76■□□□□ 0.11
COL21A1Q96P44 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.76■□□□□ 0.11
COL21A1Q96P44 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
COL21A1Q96P44 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.76■□□□□ 0.11
COL21A1Q96P44 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.76■□□□□ 0.11
COL21A1Q96P44 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.76■□□□□ 0.11
COL21A1Q96P44 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 TERC-201ENST00000602385 541 ntBASIC15.75■□□□□ 0.11
COL21A1Q96P44 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 AC008667.4-201ENST00000607370 168 ntBASIC15.75■□□□□ 0.11
COL21A1Q96P44 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
COL21A1Q96P44 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.75■□□□□ 0.11
COL21A1Q96P44 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL21A1Q96P44 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.74■□□□□ 0.11
COL21A1Q96P44 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL21A1Q96P44 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
COL21A1Q96P44 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
COL21A1Q96P44 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
COL21A1Q96P44 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL21A1Q96P44 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
COL21A1Q96P44 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
COL21A1Q96P44 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL21A1Q96P44 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
COL21A1Q96P44 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL21A1Q96P44 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.74■□□□□ 0.11
COL21A1Q96P44 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
COL21A1Q96P44 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL21A1Q96P44 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL21A1Q96P44 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL21A1Q96P44 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL21A1Q96P44 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
COL21A1Q96P44 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.74■□□□□ 0.11
COL21A1Q96P44 AL590627.1-203ENST00000421194 1026 ntBASIC15.74■□□□□ 0.11
COL21A1Q96P44 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.74■□□□□ 0.11
COL21A1Q96P44 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.74■□□□□ 0.11
COL21A1Q96P44 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.74■□□□□ 0.11
COL21A1Q96P44 IGHV3-65-201ENST00000523210 341 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms