Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN4Q96NY8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NECTIN4Q96NY8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NECTIN4Q96NY8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NECTIN4Q96NY8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
NECTIN4Q96NY8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
NECTIN4Q96NY8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.08■□□□□ 0.33
NECTIN4Q96NY8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.08■□□□□ 0.33
NECTIN4Q96NY8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 SPDYE17-201ENST00000412399 783 ntBASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 AC123567.1-201ENST00000548294 1261 ntBASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 AC133552.6-201ENST00000613406 534 ntBASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 MIR6069-201ENST00000620069 79 ntBASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NECTIN4Q96NY8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 AC009113.1-201ENST00000570267 2443 ntBASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 BOLA2P3-201ENST00000404566 256 ntBASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 ELK1P1-201ENST00000485699 580 ntBASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 RRP7BP-205ENST00000566851 833 ntBASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 COX11-210ENST00000639671 696 ntBASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 AL390961.4-201ENST00000623958 2535 ntBASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
NECTIN4Q96NY8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 BICD1-207ENST00000551848 1962 ntBASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.06■□□□□ 0.32
NECTIN4Q96NY8 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms