Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHFRQ96EP1 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.82■□□□□ 0.28
CHFRQ96EP1 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.82■□□□□ 0.28
CHFRQ96EP1 AL079307.3-201ENST00000556114 283 ntBASIC16.82■□□□□ 0.28
CHFRQ96EP1 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.82■□□□□ 0.28
CHFRQ96EP1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.82■□□□□ 0.28
CHFRQ96EP1 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.82■□□□□ 0.28
CHFRQ96EP1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.82■□□□□ 0.28
CHFRQ96EP1 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.82■□□□□ 0.28
CHFRQ96EP1 AL358472.5-202ENST00000641448 1267 ntBASIC16.82■□□□□ 0.28
CHFRQ96EP1 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHFRQ96EP1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHFRQ96EP1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHFRQ96EP1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHFRQ96EP1 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHFRQ96EP1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHFRQ96EP1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHFRQ96EP1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHFRQ96EP1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHFRQ96EP1 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHFRQ96EP1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHFRQ96EP1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHFRQ96EP1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHFRQ96EP1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHFRQ96EP1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CHFRQ96EP1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHFRQ96EP1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHFRQ96EP1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHFRQ96EP1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHFRQ96EP1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 AL512652.2-201ENST00000625156 1716 ntBASIC16.8■□□□□ 0.28
CHFRQ96EP1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHFRQ96EP1 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHFRQ96EP1 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHFRQ96EP1 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHFRQ96EP1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 AL512361.1-201ENST00000554200 418 ntBASIC16.8■□□□□ 0.28
CHFRQ96EP1 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 AL132655.2-201ENST00000596276 594 ntBASIC16.8■□□□□ 0.28
CHFRQ96EP1 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.8■□□□□ 0.28
CHFRQ96EP1 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.8■□□□□ 0.28
CHFRQ96EP1 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.8■□□□□ 0.28
CHFRQ96EP1 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.8■□□□□ 0.28
CHFRQ96EP1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHFRQ96EP1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHFRQ96EP1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHFRQ96EP1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHFRQ96EP1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHFRQ96EP1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CHFRQ96EP1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.79■□□□□ 0.28
CHFRQ96EP1 AL645728.1-201ENST00000366221 2101 ntBASIC16.79■□□□□ 0.28
CHFRQ96EP1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHFRQ96EP1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
CHFRQ96EP1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.79■□□□□ 0.28
CHFRQ96EP1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHFRQ96EP1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.79■□□□□ 0.28
CHFRQ96EP1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CHFRQ96EP1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.79■□□□□ 0.28
CHFRQ96EP1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHFRQ96EP1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CHFRQ96EP1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms