Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN23Q96B33 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN23Q96B33 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN23Q96B33 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN23Q96B33 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN23Q96B33 KLF2P4-201ENST00000451959 1225 ntBASIC16.38■□□□□ 0.21
CLDN23Q96B33 CTBP2P5-201ENST00000454986 1264 ntBASIC16.38■□□□□ 0.21
CLDN23Q96B33 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 RNA5SP412-201ENST00000516234 123 ntBASIC16.38■□□□□ 0.21
CLDN23Q96B33 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN23Q96B33 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN23Q96B33 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLDN23Q96B33 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.38■□□□□ 0.21
CLDN23Q96B33 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN23Q96B33 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN23Q96B33 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN23Q96B33 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN23Q96B33 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN23Q96B33 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CLDN23Q96B33 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN23Q96B33 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN23Q96B33 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN23Q96B33 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLDN23Q96B33 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN23Q96B33 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN23Q96B33 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN23Q96B33 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN23Q96B33 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN23Q96B33 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN23Q96B33 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN23Q96B33 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN23Q96B33 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN23Q96B33 HIST3H2BA-201ENST00000436555 524 ntBASIC16.37■□□□□ 0.21
CLDN23Q96B33 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN23Q96B33 RN7SL399P-201ENST00000471648 279 ntBASIC16.37■□□□□ 0.21
CLDN23Q96B33 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN23Q96B33 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN23Q96B33 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN23Q96B33 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN23Q96B33 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.37■□□□□ 0.21
CLDN23Q96B33 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.37■□□□□ 0.21
CLDN23Q96B33 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.37■□□□□ 0.21
CLDN23Q96B33 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.37■□□□□ 0.21
CLDN23Q96B33 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.37■□□□□ 0.21
CLDN23Q96B33 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLDN23Q96B33 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN23Q96B33 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN23Q96B33 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CLDN23Q96B33 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
CLDN23Q96B33 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN23Q96B33 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLDN23Q96B33 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN23Q96B33 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLDN23Q96B33 AC020907.1-201ENST00000616460 1350 ntBASIC16.37■□□□□ 0.21
CLDN23Q96B33 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLDN23Q96B33 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN23Q96B33 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN23Q96B33 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN23Q96B33 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CLDN23Q96B33 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
CLDN23Q96B33 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN23Q96B33 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN23Q96B33 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN23Q96B33 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDN23Q96B33 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
CLDN23Q96B33 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN23Q96B33 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN23Q96B33 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.36■□□□□ 0.21
CLDN23Q96B33 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN23Q96B33 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN23Q96B33 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN23Q96B33 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN23Q96B33 ACTG1P3-201ENST00000431775 1114 ntBASIC16.36■□□□□ 0.21
CLDN23Q96B33 AL355994.2-201ENST00000447882 704 ntBASIC16.36■□□□□ 0.21
CLDN23Q96B33 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.36■□□□□ 0.21
CLDN23Q96B33 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN23Q96B33 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.36■□□□□ 0.21
CLDN23Q96B33 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN23Q96B33 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms