Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.69■□□□□ 0.42
SHC3Q92529 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.69■□□□□ 0.42
SHC3Q92529 AC092474.2-201ENST00000424288 719 ntBASIC17.69■□□□□ 0.42
SHC3Q92529 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.69■□□□□ 0.42
SHC3Q92529 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.69■□□□□ 0.42
SHC3Q92529 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.69■□□□□ 0.42
SHC3Q92529 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.69■□□□□ 0.42
SHC3Q92529 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
SHC3Q92529 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SHC3Q92529 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.69■□□□□ 0.42
SHC3Q92529 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.69■□□□□ 0.42
SHC3Q92529 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHC3Q92529 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.69■□□□□ 0.42
SHC3Q92529 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHC3Q92529 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
SHC3Q92529 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.69■□□□□ 0.42
SHC3Q92529 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHC3Q92529 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SHC3Q92529 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHC3Q92529 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHC3Q92529 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHC3Q92529 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.69■□□□□ 0.42
SHC3Q92529 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHC3Q92529 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHC3Q92529 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHC3Q92529 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHC3Q92529 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHC3Q92529 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHC3Q92529 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.68■□□□□ 0.42
SHC3Q92529 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.68■□□□□ 0.42
SHC3Q92529 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.68■□□□□ 0.42
SHC3Q92529 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
SHC3Q92529 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.68■□□□□ 0.42
SHC3Q92529 AL591424.1-201ENST00000442569 1213 ntBASIC17.68■□□□□ 0.42
SHC3Q92529 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SHC3Q92529 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.68■□□□□ 0.42
SHC3Q92529 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.68■□□□□ 0.42
SHC3Q92529 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.68■□□□□ 0.42
SHC3Q92529 PDPK2P-202ENST00000562415 1191 ntBASIC17.68■□□□□ 0.42
SHC3Q92529 AC140113.2-201ENST00000604370 208 ntBASIC17.68■□□□□ 0.42
SHC3Q92529 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.68■□□□□ 0.42
SHC3Q92529 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.68■□□□□ 0.42
SHC3Q92529 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SHC3Q92529 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SHC3Q92529 PCDHA1-201ENST00000378133 2726 ntBASIC17.68■□□□□ 0.42
SHC3Q92529 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.68■□□□□ 0.42
SHC3Q92529 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
SHC3Q92529 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SHC3Q92529 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHC3Q92529 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.67■□□□□ 0.42
SHC3Q92529 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHC3Q92529 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SHC3Q92529 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.67■□□□□ 0.42
SHC3Q92529 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHC3Q92529 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SHC3Q92529 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHC3Q92529 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHC3Q92529 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.67■□□□□ 0.42
SHC3Q92529 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHC3Q92529 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHC3Q92529 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHC3Q92529 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.67■□□□□ 0.42
SHC3Q92529 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHC3Q92529 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHC3Q92529 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHC3Q92529 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SHC3Q92529 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SHC3Q92529 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.67■□□□□ 0.42
SHC3Q92529 AC027601.4-201ENST00000611259 610 ntBASIC17.67■□□□□ 0.42
SHC3Q92529 FAM197Y3-203ENST00000618346 717 ntBASIC17.67■□□□□ 0.42
SHC3Q92529 AL513190.1-201ENST00000621254 727 ntBASIC17.67■□□□□ 0.42
SHC3Q92529 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.67■□□□□ 0.42
SHC3Q92529 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.67■□□□□ 0.42
SHC3Q92529 AC092919.2-201ENST00000623631 1645 ntBASIC17.67■□□□□ 0.42
SHC3Q92529 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SHC3Q92529 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms