Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNED1Q8TER0 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.93■□□□□ 0.78
SNED1Q8TER0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.93■□□□□ 0.78
SNED1Q8TER0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.93■□□□□ 0.78
SNED1Q8TER0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNED1Q8TER0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SNED1Q8TER0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNED1Q8TER0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNED1Q8TER0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNED1Q8TER0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SNED1Q8TER0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SNED1Q8TER0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SNED1Q8TER0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.93■□□□□ 0.78
SNED1Q8TER0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNED1Q8TER0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.93■□□□□ 0.78
SNED1Q8TER0 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNED1Q8TER0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNED1Q8TER0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNED1Q8TER0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SNED1Q8TER0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNED1Q8TER0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.93■□□□□ 0.78
SNED1Q8TER0 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.93■□□□□ 0.78
SNED1Q8TER0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNED1Q8TER0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC19.93■□□□□ 0.78
SNED1Q8TER0 AC010319.3-201ENST00000597028 470 ntBASIC19.93■□□□□ 0.78
SNED1Q8TER0 AC026979.3-201ENST00000607315 403 ntBASIC19.93■□□□□ 0.78
SNED1Q8TER0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNED1Q8TER0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNED1Q8TER0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SNED1Q8TER0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SNED1Q8TER0 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNED1Q8TER0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SNED1Q8TER0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.92■□□□□ 0.78
SNED1Q8TER0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SNED1Q8TER0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNED1Q8TER0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNED1Q8TER0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNED1Q8TER0 PCDHB17P-201ENST00000539533 2393 ntBASIC19.92■□□□□ 0.78
SNED1Q8TER0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNED1Q8TER0 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SNED1Q8TER0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNED1Q8TER0 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC19.92■□□□□ 0.78
SNED1Q8TER0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC19.92■□□□□ 0.78
SNED1Q8TER0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SNED1Q8TER0 AC245100.3-201ENST00000441281 285 ntBASIC19.92■□□□□ 0.78
SNED1Q8TER0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.92■□□□□ 0.78
SNED1Q8TER0 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.92■□□□□ 0.78
SNED1Q8TER0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.92■□□□□ 0.78
SNED1Q8TER0 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SNED1Q8TER0 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNED1Q8TER0 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.92■□□□□ 0.78
SNED1Q8TER0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.92■□□□□ 0.78
SNED1Q8TER0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.92■□□□□ 0.78
SNED1Q8TER0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.92■□□□□ 0.78
SNED1Q8TER0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNED1Q8TER0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SNED1Q8TER0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.91■□□□□ 0.78
SNED1Q8TER0 RNF165-205ENST00000588679 2904 ntBASIC19.91■□□□□ 0.78
SNED1Q8TER0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNED1Q8TER0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNED1Q8TER0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNED1Q8TER0 GGT4P-201ENST00000623672 1708 ntBASIC19.91■□□□□ 0.78
SNED1Q8TER0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNED1Q8TER0 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNED1Q8TER0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SNED1Q8TER0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNED1Q8TER0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNED1Q8TER0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SNED1Q8TER0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNED1Q8TER0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNED1Q8TER0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SNED1Q8TER0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SNED1Q8TER0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNED1Q8TER0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNED1Q8TER0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNED1Q8TER0 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19.91■□□□□ 0.78
SNED1Q8TER0 AC133552.6-201ENST00000613406 534 ntBASIC19.91■□□□□ 0.78
SNED1Q8TER0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SNED1Q8TER0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNED1Q8TER0 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNED1Q8TER0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNED1Q8TER0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SNED1Q8TER0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNED1Q8TER0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNED1Q8TER0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.91■□□□□ 0.78
SNED1Q8TER0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNED1Q8TER0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNED1Q8TER0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNED1Q8TER0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNED1Q8TER0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNED1Q8TER0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNED1Q8TER0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNED1Q8TER0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNED1Q8TER0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.9■□□□□ 0.78
SNED1Q8TER0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.9■□□□□ 0.78
SNED1Q8TER0 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SNED1Q8TER0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC19.9■□□□□ 0.78
SNED1Q8TER0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.9■□□□□ 0.78
SNED1Q8TER0 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SNED1Q8TER0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms