Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 AC098859.1-201ENST00000502915 1238 ntBASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 TEX28P1-201ENST00000613479 1221 ntBASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 TEX28P2-201ENST00000617764 1221 ntBASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYNPOQ8N3V7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 FRMD8P1-201ENST00000440433 1524 ntBASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 ZNF890P-202ENST00000530367 1156 ntBASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 AC009407.1-201ENST00000568958 598 ntBASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 RN7SL828P-201ENST00000607615 303 ntBASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 AL589739.1-201ENST00000607720 493 ntBASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYNPOQ8N3V7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 FOXO1B-201ENST00000504678 1527 ntBASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 AC007274.1-201ENST00000439805 662 ntBASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 AC140912.1-201ENST00000577171 1054 ntBASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 AC007541.1-201ENST00000570282 1469 ntBASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.8■□□□□ 0.28
SYNPOQ8N3V7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms