Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
RP1L1Q8IWN7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
RP1L1Q8IWN7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RP1L1Q8IWN7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
RP1L1Q8IWN7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.04■□□□□ -0
RP1L1Q8IWN7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
RP1L1Q8IWN7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.04■□□□□ -0
RP1L1Q8IWN7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
RP1L1Q8IWN7 AC009477.1-201ENST00000452936 217 ntBASIC15.04■□□□□ -0
RP1L1Q8IWN7 AC022494.1-201ENST00000466044 728 ntBASIC15.04■□□□□ -0
RP1L1Q8IWN7 HLA-V-204ENST00000476601 1289 ntBASIC15.04■□□□□ -0
RP1L1Q8IWN7 FAM8A2P-201ENST00000528813 1142 ntBASIC15.04■□□□□ -0
RP1L1Q8IWN7 AL606495.2-201ENST00000605867 535 ntBASIC15.04■□□□□ -0
RP1L1Q8IWN7 AL139327.4-201ENST00000612362 153 ntBASIC15.04■□□□□ -0
RP1L1Q8IWN7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
RP1L1Q8IWN7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RP1L1Q8IWN7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.04■□□□□ -0
RP1L1Q8IWN7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.03■□□□□ -0
RP1L1Q8IWN7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RP1L1Q8IWN7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.03■□□□□ -0
RP1L1Q8IWN7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 SLC7A15P-201ENST00000424028 1363 ntBASIC15.03■□□□□ -0
RP1L1Q8IWN7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.03■□□□□ -0
RP1L1Q8IWN7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RP1L1Q8IWN7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.03■□□□□ -0
RP1L1Q8IWN7 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 AC105233.2-201ENST00000523697 349 ntBASIC15.03■□□□□ -0
RP1L1Q8IWN7 AF228730.5-201ENST00000530288 346 ntBASIC15.03■□□□□ -0
RP1L1Q8IWN7 KRT17P8-201ENST00000540749 863 ntBASIC15.03■□□□□ -0
RP1L1Q8IWN7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 AC009407.1-201ENST00000568958 598 ntBASIC15.03■□□□□ -0
RP1L1Q8IWN7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.03■□□□□ -0
RP1L1Q8IWN7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.03■□□□□ -0
RP1L1Q8IWN7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RP1L1Q8IWN7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.03■□□□□ -0
RP1L1Q8IWN7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RP1L1Q8IWN7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.03■□□□□ -0
RP1L1Q8IWN7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.03■□□□□ -0
RP1L1Q8IWN7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RP1L1Q8IWN7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.03■□□□□ -0
RP1L1Q8IWN7 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.03■□□□□ -0
RP1L1Q8IWN7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.03■□□□□ -0
RP1L1Q8IWN7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 AC135050.7-201ENST00000624508 2218 ntBASIC15.03■□□□□ -0
RP1L1Q8IWN7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RP1L1Q8IWN7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.03■□□□□ -0
RP1L1Q8IWN7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RP1L1Q8IWN7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RP1L1Q8IWN7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
RP1L1Q8IWN7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RP1L1Q8IWN7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RP1L1Q8IWN7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RP1L1Q8IWN7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.02■□□□□ -0
RP1L1Q8IWN7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
RP1L1Q8IWN7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RP1L1Q8IWN7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.02■□□□□ -0
RP1L1Q8IWN7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.02■□□□□ -0
RP1L1Q8IWN7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.02■□□□□ -0
RP1L1Q8IWN7 AC007967.4-201ENST00000614700 386 ntBASIC15.02■□□□□ -0
RP1L1Q8IWN7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RP1L1Q8IWN7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RP1L1Q8IWN7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RP1L1Q8IWN7 AC131009.4-201ENST00000624048 1740 ntBASIC15.02■□□□□ -0
RP1L1Q8IWN7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RP1L1Q8IWN7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RP1L1Q8IWN7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RP1L1Q8IWN7 AC016027.1-202ENST00000607927 1699 ntBASIC15.02□□□□□ -0.01
RP1L1Q8IWN7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RP1L1Q8IWN7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RP1L1Q8IWN7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
RP1L1Q8IWN7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RP1L1Q8IWN7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RP1L1Q8IWN7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RP1L1Q8IWN7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RP1L1Q8IWN7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RP1L1Q8IWN7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.02□□□□□ -0.01
RP1L1Q8IWN7 AL080243.2-201ENST00000418783 582 ntBASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms