Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC71Q8IV32 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 MTHFR-217ENST00000641820 1569 ntBASIC15.62■□□□□ 0.09
CCDC71Q8IV32 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 KRT18P27-201ENST00000427733 1299 ntBASIC15.62■□□□□ 0.09
CCDC71Q8IV32 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 AC108751.1-201ENST00000490852 363 ntBASIC15.62■□□□□ 0.09
CCDC71Q8IV32 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 AC136632.2-201ENST00000512891 861 ntBASIC15.62■□□□□ 0.09
CCDC71Q8IV32 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 AC005052.1-201ENST00000625181 2492 ntBASIC15.62■□□□□ 0.09
CCDC71Q8IV32 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC71Q8IV32 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 MST1L-201ENST00000442552 2185 ntBASIC15.61■□□□□ 0.09
CCDC71Q8IV32 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 AC073621.1-201ENST00000392730 636 ntBASIC15.61■□□□□ 0.09
CCDC71Q8IV32 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.61■□□□□ 0.09
CCDC71Q8IV32 AC103564.2-201ENST00000432853 1299 ntBASIC15.61■□□□□ 0.09
CCDC71Q8IV32 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 IGHV3-52-201ENST00000519770 353 ntBASIC15.61■□□□□ 0.09
CCDC71Q8IV32 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 AC002347.1-201ENST00000569543 541 ntBASIC15.61■□□□□ 0.09
CCDC71Q8IV32 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 AC064836.3-201ENST00000607928 673 ntBASIC15.61■□□□□ 0.09
CCDC71Q8IV32 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 AL049757.1-201ENST00000616842 1596 ntBASIC15.61■□□□□ 0.09
CCDC71Q8IV32 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CCDC71Q8IV32 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC71Q8IV32 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CCDC71Q8IV32 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.6■□□□□ 0.09
CCDC71Q8IV32 SIGLEC16-201ENST00000599858 1437 ntBASIC15.6■□□□□ 0.09
CCDC71Q8IV32 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms