Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 AC009947.1-201ENST00000444350 727 ntBASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 SLC25A6P4-201ENST00000586535 553 ntBASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 AL773604.1-201ENST00000617417 272 ntBASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CPNE8Q86YQ8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 UNC93B6-202ENST00000528242 690 ntBASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 AL160237.2-201ENST00000556165 472 ntBASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 MIR4751-201ENST00000578027 74 ntBASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.38■□□□□ 0.37
CPNE8Q86YQ8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 AC012569.1-201ENST00000591191 1524 ntBASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 AC004870.1-201ENST00000315132 882 ntBASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CPNE8Q86YQ8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms