Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.93■□□□□ 0.14
RNF44Q7L0R7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.93■□□□□ 0.14
RNF44Q7L0R7 FAM86C2P-203ENST00000528684 1004 ntBASIC15.93■□□□□ 0.14
RNF44Q7L0R7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF44Q7L0R7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RNF44Q7L0R7 AL691403.2-201ENST00000618460 490 ntBASIC15.93■□□□□ 0.14
RNF44Q7L0R7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RNF44Q7L0R7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
RNF44Q7L0R7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RNF44Q7L0R7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
RNF44Q7L0R7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
RNF44Q7L0R7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF44Q7L0R7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
RNF44Q7L0R7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF44Q7L0R7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RNF44Q7L0R7 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF44Q7L0R7 WASH6P-202ENST00000359512 1437 ntBASIC15.93■□□□□ 0.14
RNF44Q7L0R7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF44Q7L0R7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
RNF44Q7L0R7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF44Q7L0R7 AKAP8P1-201ENST00000434743 1349 ntBASIC15.93■□□□□ 0.14
RNF44Q7L0R7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF44Q7L0R7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RNF44Q7L0R7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 AC006538.1-201ENST00000567905 1585 ntBASIC15.92■□□□□ 0.14
RNF44Q7L0R7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 AL671277.1-201ENST00000429656 993 ntBASIC15.92■□□□□ 0.14
RNF44Q7L0R7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 RN7SL589P-201ENST00000481268 310 ntBASIC15.92■□□□□ 0.14
RNF44Q7L0R7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 AC022211.2-201ENST00000585075 2527 ntBASIC15.92■□□□□ 0.14
RNF44Q7L0R7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF44Q7L0R7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 AL512652.2-201ENST00000625156 1716 ntBASIC15.91■□□□□ 0.14
RNF44Q7L0R7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 AC254562.1-201ENST00000417586 456 ntBASIC15.91■□□□□ 0.14
RNF44Q7L0R7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.91■□□□□ 0.14
RNF44Q7L0R7 AL135744.1-201ENST00000565098 629 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms