Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17■□□□□ 0.31
CASC4Q6P4E1 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CASC4Q6P4E1 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CASC4Q6P4E1 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17■□□□□ 0.31
CASC4Q6P4E1 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CASC4Q6P4E1 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CASC4Q6P4E1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CASC4Q6P4E1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17■□□□□ 0.31
CASC4Q6P4E1 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17■□□□□ 0.31
CASC4Q6P4E1 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CASC4Q6P4E1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17■□□□□ 0.31
CASC4Q6P4E1 HIST2H3DP1-201ENST00000401004 416 ntBASIC17■□□□□ 0.31
CASC4Q6P4E1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17■□□□□ 0.31
CASC4Q6P4E1 SAPCD2P3-201ENST00000455031 850 ntBASIC17■□□□□ 0.31
CASC4Q6P4E1 AC087163.2-201ENST00000457299 853 ntBASIC17■□□□□ 0.31
CASC4Q6P4E1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17■□□□□ 0.31
CASC4Q6P4E1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CASC4Q6P4E1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17■□□□□ 0.31
CASC4Q6P4E1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CASC4Q6P4E1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17■□□□□ 0.31
CASC4Q6P4E1 AL671710.1-201ENST00000610245 2349 ntBASIC17■□□□□ 0.31
CASC4Q6P4E1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CASC4Q6P4E1 AL139011.1-202ENST00000642063 584 ntBASIC17■□□□□ 0.31
CASC4Q6P4E1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CASC4Q6P4E1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CASC4Q6P4E1 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
CASC4Q6P4E1 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CASC4Q6P4E1 ME2P1-201ENST00000426028 1970 ntBASIC17■□□□□ 0.31
CASC4Q6P4E1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17■□□□□ 0.31
CASC4Q6P4E1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CASC4Q6P4E1 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17■□□□□ 0.31
CASC4Q6P4E1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17■□□□□ 0.31
CASC4Q6P4E1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17■□□□□ 0.31
CASC4Q6P4E1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CASC4Q6P4E1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17■□□□□ 0.31
CASC4Q6P4E1 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CASC4Q6P4E1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CASC4Q6P4E1 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17■□□□□ 0.31
CASC4Q6P4E1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 AC006504.4-201ENST00000592118 1568 ntBASIC16.99■□□□□ 0.31
CASC4Q6P4E1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 ELK2BP-201ENST00000415014 1224 ntBASIC16.99■□□□□ 0.31
CASC4Q6P4E1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 AF228730.7-201ENST00000641842 219 ntBASIC16.99■□□□□ 0.31
CASC4Q6P4E1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 AC002310.6-201ENST00000624451 1377 ntBASIC16.99■□□□□ 0.31
CASC4Q6P4E1 AL513523.2-202ENST00000427283 2040 ntBASIC16.99■□□□□ 0.31
CASC4Q6P4E1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CASC4Q6P4E1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 CICP6-201ENST00000457191 2729 ntBASIC16.98■□□□□ 0.31
CASC4Q6P4E1 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms