Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 SPDYE17-201ENST00000412399 783 ntBASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LYSMD4Q5XG99 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 AL589702.1-201ENST00000641229 1509 ntBASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 AC234783.1-201ENST00000441761 496 ntBASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 AC023310.3-201ENST00000557027 670 ntBASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 AC100756.1-201ENST00000562736 682 ntBASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 AC138749.3-201ENST00000567691 622 ntBASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 AC061975.2-201ENST00000581722 295 ntBASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 AC116165.1-201ENST00000611806 668 ntBASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 AC020765.3-201ENST00000613051 740 ntBASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 AL109936.8-201ENST00000641772 604 ntBASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LYSMD4Q5XG99 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
LYSMD4Q5XG99 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
LYSMD4Q5XG99 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 ELK1P1-201ENST00000485699 580 ntBASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.14■□□□□ 0.17
LYSMD4Q5XG99 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms