Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RC3H1Q5TC82 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RC3H1Q5TC82 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RC3H1Q5TC82 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RC3H1Q5TC82 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC20.62■□□□□ 0.89
RC3H1Q5TC82 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.62■□□□□ 0.89
RC3H1Q5TC82 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.62■□□□□ 0.89
RC3H1Q5TC82 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RC3H1Q5TC82 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.62■□□□□ 0.89
RC3H1Q5TC82 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RC3H1Q5TC82 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RC3H1Q5TC82 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RC3H1Q5TC82 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RC3H1Q5TC82 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RC3H1Q5TC82 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RC3H1Q5TC82 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RC3H1Q5TC82 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 CYP4F24P-201ENST00000586049 1580 ntBASIC20.61■□□□□ 0.89
RC3H1Q5TC82 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 ACTBP11-201ENST00000436287 1126 ntBASIC20.61■□□□□ 0.89
RC3H1Q5TC82 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 FAM8A2P-201ENST00000528813 1142 ntBASIC20.61■□□□□ 0.89
RC3H1Q5TC82 AL583810.1-201ENST00000553344 1045 ntBASIC20.61■□□□□ 0.89
RC3H1Q5TC82 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 MIR4538-201ENST00000581377 78 ntBASIC20.61■□□□□ 0.89
RC3H1Q5TC82 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 AC233724.13-201ENST00000598383 410 ntBASIC20.61■□□□□ 0.89
RC3H1Q5TC82 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.61■□□□□ 0.89
RC3H1Q5TC82 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 AC245100.3-201ENST00000441281 285 ntBASIC20.6■□□□□ 0.89
RC3H1Q5TC82 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 SUOX-214ENST00000551841 906 ntTSL 3 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 MIR4321-201ENST00000592276 80 ntBASIC20.6■□□□□ 0.89
RC3H1Q5TC82 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 AL136982.4-201ENST00000437689 1740 ntBASIC20.6■□□□□ 0.89
RC3H1Q5TC82 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.6■□□□□ 0.89
RC3H1Q5TC82 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms